Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0152
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.8  

>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 239 KNLCYKNYIYVPAKLITFCLKT 174
           K  CYK +I V A +  F LKT
Sbjct: 165 KEECYKPFINVNAHVAQFTLKT 186


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 239 KNLCYKNYIYVPAKLITFCLKT 174
           K  CYK ++ V A +  F LKT
Sbjct: 165 KEECYKPFVNVNAHVAQFTLKT 186


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/39 (23%), Positives = 22/39 (56%)
 Frame = +2

Query: 419  YTFIN*ESSL*VYVTFVNVFDFNFLFIQF*PSKLLNQLF 535
            +T+   ++ + VY+T++ +    F+F+ F    ++ Q F
Sbjct: 1262 FTYFEDKNEIGVYITYLQLEPIGFVFLIFFALLMVIQFF 1300


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/39 (23%), Positives = 22/39 (56%)
 Frame = +2

Query: 419  YTFIN*ESSL*VYVTFVNVFDFNFLFIQF*PSKLLNQLF 535
            +T+   ++ + VY+T++ +    F+F+ F    ++ Q F
Sbjct: 1262 FTYFEDKNEIGVYITYLQLEPIGFVFLIFFALLMVIQFF 1300


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 492 YLYNFSHPNS 521
           Y YN +HPNS
Sbjct: 359 YYYNKNHPNS 368


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 492 YLYNFSHPNS 521
           Y YN +HPNS
Sbjct: 307 YYYNKNHPNS 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,806
Number of Sequences: 336
Number of extensions: 4130
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)