Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0152
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.4  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   7.1  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   9.4  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 523 EPVVLELNLADIDNMYLFVEKVYGI 597
           EP++LELN+  ++N+  F+E   G+
Sbjct: 446 EPMILELNVPALENVQ-FLENTIGV 469


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -2

Query: 595  SRTLSPQTNTYYLCPLNLTPKQLVQEFGWLKLY 497
            + T  P    + +  + +TP      FGW K++
Sbjct: 1234 AHTAKPYHGGFLMTDVKITPANTEGRFGWFKVH 1266


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -2

Query: 595  SRTLSPQTNTYYLCPLNLTPKQLVQEFGWLKLY 497
            + T  P    + +  + +TP      FGW K++
Sbjct: 1235 AHTAKPYHGGFLMTDVKITPANTEGRFGWFKVH 1267


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = -2

Query: 667 LGV*NRSSMSDTAHY*LKCQRDHISRTLSPQTNTYYLCPLNLTPKQLVQEF 515
           L V  R++  +T     +C++DH+ R  + +++   +   +L  + LV  F
Sbjct: 143 LHVMERNNWKETHQLIQECEQDHVQRLSNQRSHYKRIQCYSLKQRSLVDAF 193


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 81  HLALFCSSNSLKYGIIGNELKLAGCWY 161
           HLA+ C+S  +   ++G   KL  C Y
Sbjct: 789 HLAVSCNSEPIVKALLGAGAKLHYCDY 815


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,052
Number of Sequences: 2352
Number of extensions: 15677
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)