Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0150
         (706 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IER2 Cluster: Putative uncharacterized protein MAL13P...    33   6.8  
UniRef50_Q9ZLJ9 Cluster: Putative; n=4; Helicobacter|Rep: Putati...    33   9.0  

>UniRef50_Q8IER2 Cluster: Putative uncharacterized protein MAL13P1.27;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            MAL13P1.27 - Plasmodium falciparum (isolate 3D7)
          Length = 2295

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -1

Query: 256  ILQSALRLLNEVSIKFRLPLIT-NLRIDSIRSHNDICILKNIYLFVCAF 113
            +++  L  +    +K  LP+I  NL+  SI+S N I  L  +YL +C +
Sbjct: 1855 VIEDILNDIGPYGMKKMLPMIILNLKTSSIKSKNIISYLDTLYLIICKY 1903


>UniRef50_Q9ZLJ9 Cluster: Putative; n=4; Helicobacter|Rep: Putative
           - Helicobacter pylori J99 (Campylobacter pylori J99)
          Length = 150

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 280 SLFDVRITCFVNRYENINGYGNIK*FY 360
           ++ DVR T  +NR+ N N YG++  FY
Sbjct: 69  AIIDVRTTPLINRFTNYNAYGSLNGFY 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,555,656
Number of Sequences: 1657284
Number of extensions: 12680698
Number of successful extensions: 22563
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22561
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)