Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0150
         (706 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.6  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 511 WVMGIHICC*YLCAPV 558
           W+ GIH+C  +L   V
Sbjct: 102 WIFGIHLCKLWLTCDV 117


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 511 WVMGIHICC*YLCAPV 558
           W+ GIH+C  +L   V
Sbjct: 102 WIFGIHLCKLWLTCDV 117


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 511 WVMGIHICC*YLCAPV 558
           W+ GIH+C  +L   V
Sbjct: 102 WIFGIHLCKLWLTCDV 117


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = +3

Query: 204 NRNLMLTSFNNLSADCNIRVCVIHTQSF*RSYYLFC 311
           N NL+   +  LS DC++ V     Q      Y  C
Sbjct: 117 NYNLLEDIYETLSYDCDVDVSTFFDQLGQEVIYTAC 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,315
Number of Sequences: 438
Number of extensions: 4086
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)