Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0149
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 170 7e-43
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 170 7e-43
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 170 7e-43
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 170 7e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 170 7e-43
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 170 7e-43
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 170 7e-43
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 170 7e-43
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 170 7e-43
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 167 8e-42
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 162 2e-40
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 97 1e-20
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 92 3e-19
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 89 3e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 61 8e-10
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 43 2e-04
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 3.9
Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 28 5.1
AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein. 28 5.1
AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein. 28 5.1
AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 28 5.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 170 bits (414), Expect = 7e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
YANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK+EYDESGP IVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
Score = 167 bits (405), Expect = 8e-42
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELP GQVIT+GNERFRCPEA+FQPSFLG
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLG 269
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
MES GIHET YNSIMKCD+DIRKD
Sbjct: 270 MESAGIHETSYNSIMKCDIDIRKD 293
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 170 bits (414), Expect = 7e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
YANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK+EYDESGP IVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
Score = 167 bits (407), Expect = 5e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELP GQVIT+GNERFRCPEALFQPSFLG
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLG 269
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
MES GIHET YNSIMKCD+DIRKD
Sbjct: 270 MESAGIHETSYNSIMKCDIDIRKD 293
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 170 bits (414), Expect = 7e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
YANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK+EYDESGP IVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
Score = 167 bits (405), Expect = 8e-42
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELP GQVIT+GNERFRCPEA+FQPSFLG
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLG 269
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
MES GIHET YNSIMKCD+DIRKD
Sbjct: 270 MESAGIHETSYNSIMKCDIDIRKD 293
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 170 bits (414), Expect = 7e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
YANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK+EYDESGP IVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
Score = 167 bits (407), Expect = 5e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELP GQVIT+GNERFRCPEALFQPSFLG
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLG 269
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
MES GIHET YNSIMKCD+DIRKD
Sbjct: 270 MESAGIHETSYNSIMKCDIDIRKD 293
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 170 bits (414), Expect = 7e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
YANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK+EYDESGP IVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
Score = 167 bits (407), Expect = 5e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELP GQVIT+GNERFRCPEALFQPSFLG
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLG 269
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
MES GIHET YNSIMKCD+DIRKD
Sbjct: 270 MESAGIHETSYNSIMKCDIDIRKD 293
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 170 bits (414), Expect = 7e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
YANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK+EYDESGP IVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
Score = 167 bits (405), Expect = 8e-42
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELP GQVIT+GNERFRCPEA+FQPSFLG
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLG 269
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
MES GIHET YNSIMKCD+DIRKD
Sbjct: 270 MESAGIHETSYNSIMKCDIDIRKD 293
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 170 bits (414), Expect = 7e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
YANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 251 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 310
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK+EYDESGP IVHRKCF
Sbjct: 311 QMWISKQEYDESGPSIVHRKCF 332
Score = 167 bits (407), Expect = 5e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELP GQVIT+GNERFRCPEALFQPSFLG
Sbjct: 166 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLG 225
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
MES GIHET YNSIMKCD+DIRKD
Sbjct: 226 MESAGIHETSYNSIMKCDIDIRKD 249
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 170 bits (414), Expect = 7e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
YANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 281 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 340
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK+EYDESGP IVHRKCF
Sbjct: 341 QMWISKQEYDESGPSIVHRKCF 362
Score = 167 bits (407), Expect = 5e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELP GQVIT+GNERFRCPEALFQPSFLG
Sbjct: 196 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLG 255
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
MES GIHET YNSIMKCD+DIRKD
Sbjct: 256 MESAGIHETSYNSIMKCDIDIRKD 279
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 170 bits (414), Expect = 7e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
YANTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 354
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK+EYDESGP IVHRKCF
Sbjct: 355 QMWISKQEYDESGPSIVHRKCF 376
Score = 167 bits (407), Expect = 5e-42
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELP GQVIT+GNERFRCPEALFQPSFLG
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLG 269
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
MES GIHET YNSIMKCD+DIRKD
Sbjct: 270 MESAGIHETSYNSIMKCDIDIRKD 293
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 167 bits (405), Expect = 8e-42
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELP GQVIT+GNERFRCPEA+FQPSFLG
Sbjct: 210 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLG 269
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
MES GIHET YNSIMKCD+DIRKD
Sbjct: 270 MESAGIHETSYNSIMKCDIDIRKD 293
Score = 164 bits (399), Expect = 4e-41
Identities = 77/82 (93%), Positives = 80/82 (97%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
YANTV+SGGTTMYPGIADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 295 YANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQ 353
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK+EYDESGP IVHRKCF
Sbjct: 354 QMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 162 bits (394), Expect = 2e-40
Identities = 74/82 (90%), Positives = 79/82 (96%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
YANTV+SGGT+M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ
Sbjct: 294 YANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ 353
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK+EYDESGP IVHRKCF
Sbjct: 354 QMWISKQEYDESGPSIVHRKCF 375
Score = 153 bits (372), Expect = 8e-38
Identities = 70/84 (83%), Positives = 75/84 (89%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVA DFE E+A AA+S+SLEKSYELP GQVITIGNERFRCPE LFQP+F+G
Sbjct: 209 VRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIG 268
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME GIHET Y SIMKCDVDIRKD
Sbjct: 269 MEGAGIHETTYQSIMKCDVDIRKD 292
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 96.7 bits (230), Expect = 1e-20
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLS 426
++N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL
Sbjct: 352 FSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLG 411
Query: 427 TFQQMWISKEEYDESGPGIVHRKC 498
TFQQMW+SK EYDESG IV +KC
Sbjct: 412 TFQQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 92.3 bits (219), Expect = 3e-19
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y+N V+SGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF+
Sbjct: 293 YSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFR 352
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
+MW+ K+EY++ G +H++ F
Sbjct: 353 KMWLGKKEYEDMGASAMHKRFF 374
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/83 (45%), Positives = 49/83 (59%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VR++KE CY+ALD T + S++ SY LP I I N FR PE LF+P +G
Sbjct: 213 VREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIG 267
Query: 182 MESCGIHETVYNSIMKCDVDIRK 250
E G+ V SIMKCDVD+R+
Sbjct: 268 TEWPGMAHVVNQSIMKCDVDLRQ 290
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VR +KEKLCY+A D EQE A +T L + Y LP G+VI +G ERF PE LFQP +
Sbjct: 213 VRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLIN 272
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
+E G+ E ++ I D+D R D
Sbjct: 273 VEKAGLSELLFGCIQASDIDTRLD 296
Score = 72.1 bits (169), Expect = 3e-13
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITAL-----------APSTIKIKIIAPPERKYSVWIG 402
Y + V+SGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++G
Sbjct: 298 YKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLG 357
Query: 403 GSILASL--STFQQMWISKEEYDESG 474
G++LA+L Q W+SK+EY+E G
Sbjct: 358 GAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 60.9 bits (141), Expect = 8e-10
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 16/94 (17%)
Frame = +1
Query: 250 GPYANTVMSGGTTMYPGIADRMQKEITALA----------------PSTIKIKIIAPPER 381
G Y N V+SGG+TM+ A ++Q+++ L+ P I +++I+ +
Sbjct: 321 GLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQ 380
Query: 382 KYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 483
+Y+VW GGS+LAS S F Q+ +K EY E GP I
Sbjct: 381 RYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Frame = +2
Query: 11 IKEKLCYVALDFEQEMA---TAAAS-----TSLEKSYELPXGQVITIGNERFRCPEALFQ 166
IKEK CYV D +E T AA + + P + +G ERF PE F
Sbjct: 234 IKEKFCYVCPDVMKEFVKYDTDAAKWLRTYDGINSITKKPFN--VDVGYERFLGPEIFFH 291
Query: 167 PSFLGME-SCGIHETVYNSIMKCDVDIRK 250
P F E + I +T+ I +C +D+R+
Sbjct: 292 PEFCNPEFTTPISDTIDTLIQQCPIDVRR 320
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/68 (33%), Positives = 45/68 (66%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N ++GG ++ PGIA+++++E++ + P+TI ++ P R + ++G I+AS STF+
Sbjct: 472 YRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFE 531
Query: 436 QMWISKEE 459
IS ++
Sbjct: 532 DSCISLQQ 539
Score = 50.8 bits (116), Expect = 8e-07
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +2
Query: 17 EKLCYVALDFEQEMATAAAST--SLEKSYELPXGQV-ITIGNERFRCPEALFQPSFLGME 187
E+ YV D+++E + T SL+ P Q I N RF C E LF+P G++
Sbjct: 389 EQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLD 448
Query: 188 SCGIHETVYNSIMKCDVDIRK 250
+ G+H+ ++ +I++C +D R+
Sbjct: 449 TKGLHQLIHEAILQCPIDSRR 469
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 119 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 247
I +G ERF PE LF PS + ++ CG+ E V SI +C +R
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALR 305
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 262 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTF 432
N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+
Sbjct: 311 NIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTAS 366
Query: 433 QQMWISKEEYDESGPGI 483
+ WI+++++DE G +
Sbjct: 367 KVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 119 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 247
I +G ERF PE LF PS + ++ CG+ E V SI +C +R
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALR 305
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 262 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTF 432
N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+
Sbjct: 311 NIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTAS 366
Query: 433 QQMWISKEEYDESGPGI 483
+ WI+++++DE G +
Sbjct: 367 KVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 31.9 bits (69), Expect = 0.41
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP----PERK----YSVWIGGS 408
+ N +++GG + PG+ R+++EI + + KI +I E K + W+G S
Sbjct: 210 FPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGAS 269
Query: 409 ILASL-STFQQMWISKEEY 462
+L SL T ++ ++ EE+
Sbjct: 270 LLGSLRETIERKSLTLEEW 288
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 294 PRYRRQDAEGDHRXRALDHQDQDHRSPREEVLR 392
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical
protein H15N14.1e protein.
Length = 893
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +1
Query: 328 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF*A 507
+AL+ + KIIA KYS S + ++ + KEE D +G + + K +
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEKK--S 293
Query: 508 GGRVNPVLCGVVL 546
G R N + V L
Sbjct: 294 GWRKNETMHNVTL 306
>Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical
protein H15N14.1d protein.
Length = 912
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +1
Query: 328 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF*A 507
+AL+ + KIIA KYS S + ++ + KEE D +G + + K +
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEKK--S 293
Query: 508 GGRVNPVLCGVVL 546
G R N + V L
Sbjct: 294 GWRKNETMHNVTL 306
>Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical
protein H15N14.1c protein.
Length = 964
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +1
Query: 328 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF*A 507
+AL+ + KIIA KYS S + ++ + KEE D +G + + K +
Sbjct: 307 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEKK--S 364
Query: 508 GGRVNPVLCGVVL 546
G R N + V L
Sbjct: 365 GWRKNETMHNVTL 377
>AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein.
Length = 893
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +1
Query: 328 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF*A 507
+AL+ + KIIA KYS S + ++ + KEE D +G + + K +
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEKK--S 293
Query: 508 GGRVNPVLCGVVL 546
G R N + V L
Sbjct: 294 GWRKNETMHNVTL 306
>AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein.
Length = 912
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +1
Query: 328 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF*A 507
+AL+ + KIIA KYS S + ++ + KEE D +G + + K +
Sbjct: 236 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEKK--S 293
Query: 508 GGRVNPVLCGVVL 546
G R N + V L
Sbjct: 294 GWRKNETMHNVTL 306
>AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein.
Length = 964
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +1
Query: 328 TALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF*A 507
+AL+ + KIIA KYS S + ++ + KEE D +G + + K +
Sbjct: 307 SALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKKEEVDTNGENVANEKK--S 364
Query: 508 GGRVNPVLCGVVL 546
G R N + V L
Sbjct: 365 GWRKNETMHNVTL 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,006,798
Number of Sequences: 27780
Number of extensions: 258633
Number of successful extensions: 716
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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