Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0149
(659 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 158 3e-39
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 158 3e-39
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 158 3e-39
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 158 3e-39
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 157 6e-39
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 157 6e-39
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 153 1e-37
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 153 1e-37
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 146 1e-35
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 142 2e-34
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 135 3e-32
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 123 9e-29
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 89 3e-18
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 85 4e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 78 5e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 66 2e-11
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 58 4e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 51 8e-07
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 50 2e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 1e-04
At5g43500.2 68418.m05318 expressed protein 31 0.68
At5g43500.1 68418.m05319 expressed protein 31 0.68
At3g43920.1 68416.m04701 ribonuclease III family protein similar... 29 2.1
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 28 6.3
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 158 bits (383), Expect = 3e-39
Identities = 70/82 (85%), Positives = 77/82 (93%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 296 YGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 355
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK EYDESGP IVHRKCF
Sbjct: 356 QMWISKSEYDESGPSIVHRKCF 377
Score = 146 bits (354), Expect = 1e-35
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKL YVALD+EQE+ TA +S+S+EK+YELP GQVITIG ERFRCPE LFQPS +G
Sbjct: 211 VRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIG 270
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME+ GIHET YNSIMKCDVDIRKD
Sbjct: 271 MEAPGIHETTYNSIMKCDVDIRKD 294
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 158 bits (383), Expect = 3e-39
Identities = 70/82 (85%), Positives = 77/82 (93%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 296 YGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 355
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWI+K EYDESGP IVHRKCF
Sbjct: 356 QMWIAKAEYDESGPSIVHRKCF 377
Score = 150 bits (364), Expect = 7e-37
Identities = 66/84 (78%), Positives = 76/84 (90%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCY+ALD+EQE+ TA S+S+EK+YELP GQVITIG+ERFRCPE L+QPS +G
Sbjct: 211 VRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIG 270
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME+ GIHET YNSIMKCDVDIRKD
Sbjct: 271 MENAGIHETTYNSIMKCDVDIRKD 294
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 158 bits (383), Expect = 3e-39
Identities = 70/82 (85%), Positives = 77/82 (93%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 296 YGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 355
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWI+K EYDESGP IVHRKCF
Sbjct: 356 QMWIAKAEYDESGPSIVHRKCF 377
Score = 149 bits (360), Expect = 2e-36
Identities = 67/84 (79%), Positives = 74/84 (88%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRD+KEKL Y+ALD+EQEM TA S+S+EKSYELP GQVITIG ERFRCPE LFQPS +G
Sbjct: 211 VRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVG 270
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME+ GIHET YNSIMKCDVDIRKD
Sbjct: 271 MEAAGIHETTYNSIMKCDVDIRKD 294
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 158 bits (383), Expect = 3e-39
Identities = 70/82 (85%), Positives = 77/82 (93%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 296 YGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 355
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWI+K EYDESGP IVHRKCF
Sbjct: 356 QMWIAKAEYDESGPSIVHRKCF 377
Score = 150 bits (364), Expect = 7e-37
Identities = 66/84 (78%), Positives = 76/84 (90%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCY+ALD+EQE+ TA S+S+EK+YELP GQVITIG+ERFRCPE L+QPS +G
Sbjct: 211 VRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIG 270
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME+ GIHET YNSIMKCDVDIRKD
Sbjct: 271 MENAGIHETTYNSIMKCDVDIRKD 294
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 157 bits (381), Expect = 6e-39
Identities = 70/82 (85%), Positives = 77/82 (93%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 296 YGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 355
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK EYDE+GPGIVHRKCF
Sbjct: 356 QMWISKAEYDEAGPGIVHRKCF 377
Score = 146 bits (354), Expect = 1e-35
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKL +VA+D+EQEM T+ S+S+EK+YELP GQVITIG ERFRCPE LFQPSF+G
Sbjct: 211 VRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVG 270
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME+ GIHET YNSIMKCDVDIRKD
Sbjct: 271 MEAAGIHETTYNSIMKCDVDIRKD 294
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 157 bits (381), Expect = 6e-39
Identities = 70/82 (85%), Positives = 77/82 (93%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 296 YGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 355
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWISK EYDE+GPGIVHRKCF
Sbjct: 356 QMWISKAEYDEAGPGIVHRKCF 377
Score = 146 bits (354), Expect = 1e-35
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKL +VA+D+EQEM T+ S+S+EK+YELP GQVITIG ERFRCPE LFQPSF+G
Sbjct: 211 VRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVG 270
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME+ GIHET YNSIMKCDVDIRKD
Sbjct: 271 MEAAGIHETTYNSIMKCDVDIRKD 294
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 153 bits (370), Expect = 1e-37
Identities = 68/82 (82%), Positives = 75/82 (91%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 296 YGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 355
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWI+K EYDESGP IVHRKCF
Sbjct: 356 QMWIAKAEYDESGPSIVHRKCF 377
Score = 143 bits (347), Expect = 8e-35
Identities = 65/84 (77%), Positives = 74/84 (88%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRD+KEKL Y+ALDFEQE+ T+ S+S+EKS+ELP GQVITIG ERFRCPE LFQPS +G
Sbjct: 211 VRDMKEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIG 270
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME+ GIHET YNSIMKCDVDIRKD
Sbjct: 271 MENPGIHETTYNSIMKCDVDIRKD 294
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 153 bits (370), Expect = 1e-37
Identities = 68/82 (82%), Positives = 75/82 (91%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 296 YGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 355
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWI+K EYDESGP IVHRKCF
Sbjct: 356 QMWIAKAEYDESGPSIVHRKCF 377
Score = 142 bits (344), Expect = 2e-34
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRD+KEKL Y+ALD+EQE+ T+ S+S+EKS+ELP GQVITIG ERFRCPE LFQPS +G
Sbjct: 211 VRDMKEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIG 270
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME+ GIHET YNSIMKCDVDIRKD
Sbjct: 271 MENPGIHETTYNSIMKCDVDIRKD 294
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 146 bits (354), Expect = 1e-35
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKL +VA+D+EQEM T+ S+S+EK+YELP GQVITIG ERFRCPE LFQPSF+G
Sbjct: 211 VRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVG 270
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME+ GIHET YNSIMKCDVDIRKD
Sbjct: 271 MEAAGIHETTYNSIMKCDVDIRKD 294
Score = 113 bits (272), Expect = 1e-25
Identities = 52/66 (78%), Positives = 60/66 (90%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 296 YGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 355
Query: 436 QMWISK 453
Q+ I +
Sbjct: 356 QVKIDQ 361
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 142 bits (343), Expect = 2e-34
Identities = 62/82 (75%), Positives = 71/82 (86%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N V+SGGTTM+PGIADRM KEI ALAP ++KIK++APPERKYSVW+GGSILASLS+F
Sbjct: 297 YGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFA 356
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
MWI+K EYDE G IVHRKCF
Sbjct: 357 PMWITKAEYDEQGGAIVHRKCF 378
Score = 141 bits (342), Expect = 3e-34
Identities = 62/84 (73%), Positives = 73/84 (86%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCY+A+D+EQEM A S++++++YELP GQVITIG ERFRCPE LFQ S +G
Sbjct: 212 VRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIG 271
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME+ GIHET YNSIMKCDVDIRKD
Sbjct: 272 METSGIHETTYNSIMKCDVDIRKD 295
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 135 bits (326), Expect = 3e-32
Identities = 59/82 (71%), Positives = 71/82 (86%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N V+SGGTTM+ GI +RM KEI ALA + ++IKI+APPERKYSVWIGGSILASLST++
Sbjct: 248 YGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYE 307
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
QMWI+K EY+E+GP IVH KCF
Sbjct: 308 QMWITKAEYEENGPAIVHTKCF 329
Score = 132 bits (319), Expect = 2e-31
Identities = 59/84 (70%), Positives = 70/84 (83%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKE+ Y+ALD+EQEM A S++++++YELP GQVITIG ERFRCPE LFQPS +G
Sbjct: 163 VRDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIG 222
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ME+ GIHE YNSIMKCD DIRKD
Sbjct: 223 METSGIHEKTYNSIMKCDDDIRKD 246
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 123 bits (297), Expect = 9e-29
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y N +M+GGTTM GI +RM KE+ AL PS++K+K++ PPE + SVWIGGSILASLSTF
Sbjct: 285 YGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFH 344
Query: 436 QMWISKEEYDESGPGIVHRKC 498
QMWI+K+EY+E G IVHRKC
Sbjct: 345 QMWITKDEYEEHGAAIVHRKC 365
Score = 117 bits (282), Expect = 6e-27
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VRDIKEKLCYVALD+EQEM +++K+Y LP GQ ITI ERF CPE LFQPS +G
Sbjct: 200 VRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIG 259
Query: 182 MESCGIHETVYNSIMKCDVDIRKD 253
ES GIHE NSI+KC VD R+D
Sbjct: 260 KESSGIHEATRNSILKCPVDTRRD 283
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 88.6 bits (210), Expect = 3e-18
Identities = 37/84 (44%), Positives = 60/84 (71%), Gaps = 3/84 (3%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGGSILASLS 426
Y++ +++GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL
Sbjct: 357 YSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLG 416
Query: 427 TFQQMWISKEEYDESGPGIVHRKC 498
+FQQMW SK EY+E G + RKC
Sbjct: 417 SFQQMWFSKSEYEEHGASYIQRKC 440
Score = 54.8 bits (126), Expect = 5e-08
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFL- 178
V DIK+ +C V + + + T+ SYELP GQ + IG +RF+ P+ +F PS +
Sbjct: 263 VGDIKDSICRVPDTPYDDKSYSNIPTT---SYELPDGQTLEIGADRFKVPDVMFNPSIVQ 319
Query: 179 ---GMESC--------GIHETVYNSIMKCDVDIRKD 253
GME G+ V SI KCDVDIR++
Sbjct: 320 TIPGMEKYAEMIPSVRGLPHMVMESINKCDVDIRRE 355
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 85.0 bits (201), Expect = 4e-17
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VR+IKEKLCY++ D+++E +T L K+Y LP G+VI +G ERF+ PEALF P +
Sbjct: 210 VREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELID 269
Query: 182 MESCGIHETVYNSIMKCDVDIR 247
+E G+ + V+ I + D+D R
Sbjct: 270 VEGDGMADMVFRCIQEMDIDNR 291
Score = 61.3 bits (142), Expect = 6e-10
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 12/85 (14%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEI------TALAPS-----TIKIKIIAPPERKYSVWIG 402
Y + V+SGG+TMYPG+ R++KEI T L + ++++I PP RK+ V++G
Sbjct: 295 YQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLG 354
Query: 403 GSILAS-LSTFQQMWISKEEYDESG 474
G++LA + + WI++E+Y E G
Sbjct: 355 GAVLAGIMKDAPEFWINREDYMEEG 379
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 78.2 bits (184), Expect = 5e-15
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Frame = +1
Query: 262 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK------YSVWIGGSILASL 423
NTV+ GGTT G R QKE L S I+ ++ PPE YS W+GG+ILA +
Sbjct: 279 NTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKV 337
Query: 424 STFQQMWISKEEYDESGPGIVHRKCF 501
Q ++K +YDE+GP +VHRKCF
Sbjct: 338 VFPQNQHVTKADYDETGPSVVHRKCF 363
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
V +KE+ A E E+A + + LP GQVI+IG ER+ EALFQPS LG
Sbjct: 195 VEKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILG 251
Query: 182 MESCGIHETVYNSI 223
+E GI E + I
Sbjct: 252 LEEHGIVEQLVRII 265
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ 435
Y + +++GG+T++P + +R++ E+ L P +KI + VW GGS+LAS F+
Sbjct: 339 YQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFE 398
Query: 436 QMWISKEEYDESGPGIVHRKCF 501
M ++K EY+E G R+ F
Sbjct: 399 SMCVTKAEYEELGSARCRRRFF 420
Score = 41.5 bits (93), Expect(2) = 9e-09
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 119 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC 232
I + NERF PE LFQP+ LGM G+ E + +I C
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSC 330
Score = 35.5 bits (78), Expect(2) = 9e-09
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKS-YELPXGQVITIG 130
V D KEKLC+V+LD +++ A +L KS Y LP G T G
Sbjct: 211 VDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKG 254
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 58.4 bits (135), Expect = 4e-09
Identities = 31/78 (39%), Positives = 43/78 (55%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP G
Sbjct: 309 VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAG 363
Query: 182 MESCGIHETVYNSIMKCD 235
M + +H+ V + CD
Sbjct: 364 MRAMSLHQAVSLCMDHCD 381
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/72 (29%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLST 429
+ V++GG+ PG+++R+++E+ PS+I I++I PP + W G ++++LS
Sbjct: 392 FKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSI 451
Query: 430 FQQMW-ISKEEY 462
F W I+++++
Sbjct: 452 FPGPWCITRKQF 463
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 50.8 bits (116), Expect = 8e-07
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 16/92 (17%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTI----------------KIKIIAPPERKY 387
Y N V+SGG+TM+ R+Q+++ + + + ++ +++ P +++
Sbjct: 325 YKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRF 384
Query: 388 SVWIGGSILASLSTFQQMWISKEEYDESGPGI 483
+VW GGS+L+S F +KEEY+E G I
Sbjct: 385 AVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +2
Query: 2 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPXGQVITIGNERFRCPEALFQPSFLG 181
VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP G
Sbjct: 309 VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAG 363
Query: 182 MESCGIHETVY 214
+ +H+ VY
Sbjct: 364 II---VHKLVY 371
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 119 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVD 241
I IG ERFRCPE LF P+ +G++ G+ E SI + D
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHD 629
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +1
Query: 259 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQ 438
++ +M+GG ++ PG+ +R++ I + P I ++ + W G S A+ F
Sbjct: 639 SSILMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLG 698
Query: 439 MWISKEEYDESG 474
+K +YDE G
Sbjct: 699 NAFTKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIGGSILASL 423
+++ + GG + G+ +++ + P T I + + E ++ W GG+IL L
Sbjct: 483 FSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGIL 542
Query: 424 STFQQMWISKEEYDESG 474
++ WI + ++ +G
Sbjct: 543 DFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +1
Query: 256 YANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIGGSILASL 423
+++ + GG + G+ +++ + P T I + + E ++ W GG+IL L
Sbjct: 495 FSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGIL 554
Query: 424 STFQQMWISKEEYDESG 474
++ WI + ++ +G
Sbjct: 555 DFGREAWIERHQWMVNG 571
>At3g43920.1 68416.m04701 ribonuclease III family protein similar to
RNA helicase/RNAseIII CAF protein [Arabidopsis thaliana]
GI:6102610; contains Pfam profiles PF02170: PAZ domain,
PF00636: RNase3 domain
Length = 1531
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1
Query: 584 RYNVLTVAFRTRTSTTPHSTGFTRPPA*KHLRWTMPGPDSSYSSFEIHICWKVD-REARM 408
R ++++ + R +T+ G+ R A + RWT PG +S F + +D RE +
Sbjct: 1007 RQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAPG---QFSLFPVPCKCGIDTREVPL 1063
Query: 407 DPPIHTE 387
DP TE
Sbjct: 1064 DPKFFTE 1070
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 208 RVQLHHEVRRRHP*--GPYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPER 381
R ++ E+ HP Y N+ G + +YP ++K+ L ++ K + PP+R
Sbjct: 337 RELIYREILEYHPQLLKDYMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDR 394
Query: 382 KYS 390
K++
Sbjct: 395 KHA 397
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,493,475
Number of Sequences: 28952
Number of extensions: 252195
Number of successful extensions: 781
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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