Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0148
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   2.8  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   2.8  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   6.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.5  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = +3

Query: 108 EKLSGLIFRLGCTLCRVRRVRLPGSLLLVLDLRASNARVIGWIHKDVSXR 257
           +KL GL    G  + R    R P S L   DL      V  W+H+D + R
Sbjct: 292 QKLDGLY---GSIVVRQPPSRDPNSHLYDFDLTTHIMLVSDWLHEDAAER 338


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = +3

Query: 108 EKLSGLIFRLGCTLCRVRRVRLPGSLLLVLDLRASNARVIGWIHKDVSXR 257
           +KL GL    G  + R    R P S L   DL      V  W+H+D + R
Sbjct: 292 QKLDGLY---GSIVVRQPPSRDPNSHLYDFDLTTHIMLVSDWLHEDAAER 338


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -1

Query: 535 NR*NTSLY*PARPVMTYASVVFA 467
           NR +T+ + P+RP +T+AS V +
Sbjct: 166 NRADTNRFPPSRPDVTFASSVIS 188


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 146  SAT*PKDQPAEFLAGSSQRVAIL 78
            +AT PKDQP      SS  +AIL
Sbjct: 1444 AATRPKDQPGGGSPASSSGMAIL 1466


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,139
Number of Sequences: 2352
Number of extensions: 12338
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)