Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0145
         (662 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14934| Best HMM Match : ASC (HMM E-Value=1.8e-05)                   33   0.21 
SB_56396| Best HMM Match : GYF (HMM E-Value=2.5)                       32   0.36 
SB_44545| Best HMM Match : ASC (HMM E-Value=4.8e-13)                   32   0.36 
SB_38475| Best HMM Match : ASC (HMM E-Value=3.1e-14)                   32   0.36 
SB_35796| Best HMM Match : ASC (HMM E-Value=7.4e-18)                   32   0.36 
SB_26571| Best HMM Match : ASC (HMM E-Value=0.84)                      32   0.36 
SB_48741| Best HMM Match : ASC (HMM E-Value=4.9e-11)                   30   1.9  

>SB_14934| Best HMM Match : ASC (HMM E-Value=1.8e-05)
          Length = 266

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 280 ICNYTESLNFLYLYQYNNIFNFLTQKL*NLING 182
           ICN+       Y   Y N+FN  TQ+  N+ING
Sbjct: 78  ICNFNPISKSRYAQNYGNLFNLSTQESNNIING 110


>SB_56396| Best HMM Match : GYF (HMM E-Value=2.5)
          Length = 143

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 280 ICNYTESLNFLYLYQYNNIFNFLTQKL*NLING 182
           ICN+       Y   Y N+FN  TQ   N+ING
Sbjct: 78  ICNFNPISKSRYAQNYGNLFNLSTQDSNNIING 110


>SB_44545| Best HMM Match : ASC (HMM E-Value=4.8e-13)
          Length = 386

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 280 ICNYTESLNFLYLYQYNNIFNFLTQKL*NLING 182
           ICN+       Y   Y N+FN  TQ   N+ING
Sbjct: 78  ICNFNPISKSRYAQNYGNLFNLSTQDSNNIING 110


>SB_38475| Best HMM Match : ASC (HMM E-Value=3.1e-14)
          Length = 421

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 280 ICNYTESLNFLYLYQYNNIFNFLTQKL*NLING 182
           ICN+       Y   Y N+FN  TQ   N+ING
Sbjct: 78  ICNFNPISKSRYAQNYGNLFNLSTQDSNNIING 110


>SB_35796| Best HMM Match : ASC (HMM E-Value=7.4e-18)
          Length = 422

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 280 ICNYTESLNFLYLYQYNNIFNFLTQKL*NLING 182
           ICN+       Y   Y N+FN  TQ   N+ING
Sbjct: 78  ICNFNPISKSRYAQNYGNLFNLSTQDSNNIING 110


>SB_26571| Best HMM Match : ASC (HMM E-Value=0.84)
          Length = 200

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 280 ICNYTESLNFLYLYQYNNIFNFLTQKL*NLING 182
           ICN+       Y   Y N+FN  TQ   N+ING
Sbjct: 78  ICNFNPISKSRYAQNYGNLFNLSTQDSNNIING 110


>SB_48741| Best HMM Match : ASC (HMM E-Value=4.9e-11)
          Length = 344

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 280 ICNYTESLNFLYLYQYNNIFNFLTQKL*NLIN 185
           ICN+       Y   Y N+FN  TQ   N+IN
Sbjct: 78  ICNFNPISKSRYAQNYGNLFNLSTQDSNNIIN 109


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,692,152
Number of Sequences: 59808
Number of extensions: 402372
Number of successful extensions: 684
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)