Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0143
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    27   0.15 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    26   0.25 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   1.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   5.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.6  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.6  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = +1

Query: 496 FQEH---VPKYTREQFSFPGVKVEKI 564
           FQE+   +P+YT  Q ++PG+ V  I
Sbjct: 410 FQEYKATLPRYTENQLNYPGITVSNI 435



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 434 TCLRDPVFWMIMKRVCNIFTVFK 502
           T +RDP+F+     + +IF  +K
Sbjct: 392 TAMRDPIFYRWHSYIDDIFQEYK 414


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +3

Query: 42  VKPMMWNEPLETGYWPKI-RLPSGDEMPVRQNNMV 143
           VK   W EPL   Y+PK+  L +    P R  N V
Sbjct: 256 VKLSNWREPLPEAYFPKLDSLVASRTWPARPVNQV 290



 Score = 25.8 bits (54), Expect = 0.34
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 496 FQEHVPKYTREQFSFPGVKVEKI 564
           F+  +P+YT  Q ++PGV V  I
Sbjct: 413 FKATLPRYTVAQLNYPGVTVTNI 435


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 469 ETSLQHLHRFQEH 507
           E  LQHLH+F  H
Sbjct: 124 EVKLQHLHQFPHH 136



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = +1

Query: 466 HETSLQHLH--RFQEHVPKYTREQFSFP 543
           HE  LQHLH  +F  H     +    FP
Sbjct: 107 HEIKLQHLHQSKFNPHEEVKLQHLHQFP 134


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +1

Query: 454 LLDDHETSLQHLHRFQEHVPKYTREQFSFPGVKVEKITTDELVTFVDEY 600
           +LD  ++  + +HR   +    T ++F +   K+E +   EL   VD++
Sbjct: 149 ILDTIKSKYRQMHRLLANYKVITSDEFFYLVSKIESLAC-ELKNTVDDF 196


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 501 LKTVKMLQTRFMIIQKTGSRRQVVYMSKEVG 409
           ++ VKML+ RF+I+ K  +     +   ++G
Sbjct: 458 IELVKMLKIRFVILNKQINNLIEYFQKNKIG 488


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 501 LKTVKMLQTRFMIIQKTGSRRQVVYMSKEVG 409
           ++ VKML+ RF+I+ K  +     +   ++G
Sbjct: 183 IELVKMLKIRFVILNKQINNLIEYFQKNKIG 213


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 492 VKMLQTRFMIIQK 454
           V MLQTRF+I+ K
Sbjct: 188 VLMLQTRFVILNK 200


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 361 ENAELWPIQHGQVHL 405
           E A LWP   G+VH+
Sbjct: 59  EAAALWPKPTGEVHV 73


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 410 PTSLDMYTTCLRDPVFWMIMKRVCN 484
           P+   +Y TC+ D    + ++R CN
Sbjct: 452 PSDCSVYYTCVSDGSKLVSIQRKCN 476


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 469 HDHPEDRIAETGSVHVQGSRHVGVL 395
           H HP+D I   G +    +R V  L
Sbjct: 380 HRHPQDEIPYCGKIFNLTTRQVRTL 404


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 476 VCNIFTVFK 502
           VCN+ TVFK
Sbjct: 125 VCNVLTVFK 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,005
Number of Sequences: 336
Number of extensions: 3400
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)