Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0143
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ301393-1|CAC34098.1| 86|Homo sapiens T-cell receptor beta ch... 35 0.32
BC066899-1|AAH66899.1| 567|Homo sapiens TAPT1 protein protein. 33 0.73
AK074494-1|BAC11022.1| 562|Homo sapiens protein ( Homo sapiens ... 33 0.73
BC016465-1|AAH16465.1| 1254|Homo sapiens TTC28 protein protein. 30 6.8
AL121825-2|CAH73824.1| 2481|Homo sapiens protein ( Human DNA seq... 30 6.8
AL050313-1|CAI17993.1| 2481|Homo sapiens protein ( Human DNA seq... 30 6.8
AL035453-1|CAI18760.1| 2481|Homo sapiens protein ( Human DNA seq... 30 6.8
AL035397-1|CAI18818.1| 2481|Homo sapiens protein ( Human DNA seq... 30 6.8
AL033538-2|CAI21502.1| 2481|Homo sapiens protein ( the GPR161 ge... 30 6.8
AL023281-1|CAI17985.1| 2481|Homo sapiens protein ( Human DNA seq... 30 6.8
AB028966-1|BAA82995.3| 2126|Homo sapiens KIAA1043 protein protein. 30 6.8
U63533-1|AAC50762.1| 593|Homo sapiens Hunc-18b protein. 30 9.0
EF592001-1|ABR37244.1| 80|Homo sapiens T cell receptor protein. 30 9.0
BT006915-1|AAP35561.1| 590|Homo sapiens syntaxin binding protei... 30 9.0
BC002869-1|AAH02869.1| 590|Homo sapiens STXBP2 protein protein. 30 9.0
AK222977-1|BAD96697.1| 593|Homo sapiens syntaxin binding protei... 30 9.0
AK222967-1|BAD96687.1| 593|Homo sapiens syntaxin binding protei... 30 9.0
AB002559-1|BAA19547.1| 579|Homo sapiens hunc18b2 protein. 30 9.0
>AJ301393-1|CAC34098.1| 86|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 86
Score = 34.7 bits (76), Expect = 0.32
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 449 PVFW--MIMKRVCNIFTVFKNMSRNILANSSASPESKWR-KLPPMSWSHSLMSTSMDISN 619
P+FW M R + F N N+ + S PE ++ K+P S+S + S +
Sbjct: 1 PLFWYRQTMMRGLELLIYFNN---NVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDS 57
Query: 620 AMYLDATEMQNKTSDMTFYGP 682
A+Y A+ SD F+GP
Sbjct: 58 AVYFCASSPSGGPSDEQFFGP 78
>BC066899-1|AAH66899.1| 567|Homo sapiens TAPT1 protein protein.
Length = 567
Score = 33.5 bits (73), Expect = 0.73
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -1
Query: 547 LRGS*TVREYISGHVLENGEDVANSFHDHPEDRIAETGSVHVQGSR-HVGVLVHVVLAIA 371
+RG ++ YI ++LE + + +SF D + T + + R H+GV+ H +A+
Sbjct: 188 IRGQSVIKLYIIYNMLEVADRLFSSFGQDILDALYWTATEPKERKRAHIGVIPHFFMAVL 247
Query: 370 QHFLHQV 350
FLH +
Sbjct: 248 YVFLHAI 254
>AK074494-1|BAC11022.1| 562|Homo sapiens protein ( Homo sapiens
cDNA FLJ90013 fis, clone HEMBA1000477. ).
Length = 562
Score = 33.5 bits (73), Expect = 0.73
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -1
Query: 547 LRGS*TVREYISGHVLENGEDVANSFHDHPEDRIAETGSVHVQGSR-HVGVLVHVVLAIA 371
+RG ++ YI ++LE + + +SF D + T + + R H+GV+ H +A+
Sbjct: 188 IRGQSVIKLYIIYNMLEVADRLFSSFGQDILDALYWTATEPKERKRAHIGVIPHFFMAVL 247
Query: 370 QHFLHQV 350
FLH +
Sbjct: 248 YVFLHAI 254
>BC016465-1|AAH16465.1| 1254|Homo sapiens TTC28 protein protein.
Length = 1254
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 296 PDGRGFQCPQTSSGYNSAVTTLDLSSKDTLSDH 198
P R P+ SSGY+S TT ++S KD+ S H
Sbjct: 1008 PPARSSSLPKVSSGYSSP-TTSEMSIKDSPSQH 1039
>AL121825-2|CAH73824.1| 2481|Homo sapiens protein ( Human DNA sequence
from clone RP11-436C9 on chromosome 22. ).
Length = 2481
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 296 PDGRGFQCPQTSSGYNSAVTTLDLSSKDTLSDH 198
P R P+ SSGY+S TT ++S KD+ S H
Sbjct: 2235 PPARSSSLPKVSSGYSSP-TTSEMSIKDSPSQH 2266
>AL050313-1|CAI17993.1| 2481|Homo sapiens protein ( Human DNA sequence
from clone CTA-754D9 on chromosome 22. ).
Length = 2481
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 296 PDGRGFQCPQTSSGYNSAVTTLDLSSKDTLSDH 198
P R P+ SSGY+S TT ++S KD+ S H
Sbjct: 2235 PPARSSSLPKVSSGYSSP-TTSEMSIKDSPSQH 2266
>AL035453-1|CAI18760.1| 2481|Homo sapiens protein ( Human DNA sequence
from clone SC22CB-42E1 on chromosome 22q12.1-12.3. ).
Length = 2481
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 296 PDGRGFQCPQTSSGYNSAVTTLDLSSKDTLSDH 198
P R P+ SSGY+S TT ++S KD+ S H
Sbjct: 2235 PPARSSSLPKVSSGYSSP-TTSEMSIKDSPSQH 2266
>AL035397-1|CAI18818.1| 2481|Homo sapiens protein ( Human DNA sequence
from clone RP6-45P1 on chromosome 22q11.22-12.3. ).
Length = 2481
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 296 PDGRGFQCPQTSSGYNSAVTTLDLSSKDTLSDH 198
P R P+ SSGY+S TT ++S KD+ S H
Sbjct: 2235 PPARSSSLPKVSSGYSSP-TTSEMSIKDSPSQH 2266
>AL033538-2|CAI21502.1| 2481|Homo sapiens protein ( the GPR161 gene
for G ).).
Length = 2481
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 296 PDGRGFQCPQTSSGYNSAVTTLDLSSKDTLSDH 198
P R P+ SSGY+S TT ++S KD+ S H
Sbjct: 2235 PPARSSSLPKVSSGYSSP-TTSEMSIKDSPSQH 2266
>AL023281-1|CAI17985.1| 2481|Homo sapiens protein ( Human DNA sequence
from clone CTA-544A11 on chromosome 22q12.1-12.3.Contains
a 5'-nucleotidase (cytosolic II-like 1) (NT5C2L1) ).
Length = 2481
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 296 PDGRGFQCPQTSSGYNSAVTTLDLSSKDTLSDH 198
P R P+ SSGY+S TT ++S KD+ S H
Sbjct: 2235 PPARSSSLPKVSSGYSSP-TTSEMSIKDSPSQH 2266
>AB028966-1|BAA82995.3| 2126|Homo sapiens KIAA1043 protein protein.
Length = 2126
Score = 30.3 bits (65), Expect = 6.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 296 PDGRGFQCPQTSSGYNSAVTTLDLSSKDTLSDH 198
P R P+ SSGY+S TT ++S KD+ S H
Sbjct: 1880 PPARSSSLPKVSSGYSSP-TTSEMSIKDSPSQH 1911
>U63533-1|AAC50762.1| 593|Homo sapiens Hunc-18b protein.
Length = 593
Score = 29.9 bits (64), Expect = 9.0
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +2
Query: 242 RHCYSLKKSEDIENLARLVLGGLEIVGDDAKVIHLTNLMKKMLSYGQYNMDKYTYVPTSL 421
RH + S+ + L R + D A + L+ ++KKM Y Q ++KY+ T L
Sbjct: 292 RHMHIADVSKKVTELLRTFCESKRLTTDKANIKDLSQILKKMPQY-QKELNKYS---THL 347
Query: 422 DMYTTCLRDPVFWMIMKRVCNI 487
+ C++ F ++++C++
Sbjct: 348 HLADDCMKH--FKGSVEKLCSV 367
>EF592001-1|ABR37244.1| 80|Homo sapiens T cell receptor protein.
Length = 80
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 515 NILANSSASPESKWR-KLPPMSWSHSLMSTSMDISNAMYLDATEMQNKTSDMTFYGP 682
N+ + S PE ++ K+P S+S + S +A+Y A+ MQ + ++ F+GP
Sbjct: 1 NVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASRMQGRDNEQ-FFGP 56
>BT006915-1|AAP35561.1| 590|Homo sapiens syntaxin binding protein 2
protein.
Length = 590
Score = 29.9 bits (64), Expect = 9.0
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +2
Query: 242 RHCYSLKKSEDIENLARLVLGGLEIVGDDAKVIHLTNLMKKMLSYGQYNMDKYTYVPTSL 421
RH + S+ + L R + D A + L+ ++KKM Y Q ++KY+ T L
Sbjct: 289 RHMHIADVSKKVTELLRTFCESKRLTTDKANIKDLSQILKKMPQY-QKELNKYS---THL 344
Query: 422 DMYTTCLRDPVFWMIMKRVCNI 487
+ C++ F ++++C++
Sbjct: 345 HLADDCMKH--FKGSVEKLCSV 364
>BC002869-1|AAH02869.1| 590|Homo sapiens STXBP2 protein protein.
Length = 590
Score = 29.9 bits (64), Expect = 9.0
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +2
Query: 242 RHCYSLKKSEDIENLARLVLGGLEIVGDDAKVIHLTNLMKKMLSYGQYNMDKYTYVPTSL 421
RH + S+ + L R + D A + L+ ++KKM Y Q ++KY+ T L
Sbjct: 289 RHMHIADVSKKVTELLRTFCESKRLTTDKANIKDLSQILKKMPQY-QKELNKYS---THL 344
Query: 422 DMYTTCLRDPVFWMIMKRVCNI 487
+ C++ F ++++C++
Sbjct: 345 HLADDCMKH--FKGSVEKLCSV 364
>AK222977-1|BAD96697.1| 593|Homo sapiens syntaxin binding protein 2
variant protein.
Length = 593
Score = 29.9 bits (64), Expect = 9.0
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +2
Query: 242 RHCYSLKKSEDIENLARLVLGGLEIVGDDAKVIHLTNLMKKMLSYGQYNMDKYTYVPTSL 421
RH + S+ + L R + D A + L+ ++KKM Y Q ++KY+ T L
Sbjct: 292 RHMHIADVSKKVTELLRTFCESKRLTTDKANIKDLSQILKKMPQY-QKELNKYS---THL 347
Query: 422 DMYTTCLRDPVFWMIMKRVCNI 487
+ C++ F ++++C++
Sbjct: 348 HLADDCMKH--FKGSVEKLCSV 367
>AK222967-1|BAD96687.1| 593|Homo sapiens syntaxin binding protein 2
variant protein.
Length = 593
Score = 29.9 bits (64), Expect = 9.0
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +2
Query: 242 RHCYSLKKSEDIENLARLVLGGLEIVGDDAKVIHLTNLMKKMLSYGQYNMDKYTYVPTSL 421
RH + S+ + L R + D A + L+ ++KKM Y Q ++KY+ T L
Sbjct: 292 RHMHIADVSKKVTELLRTFCESKRLTTDKANIKDLSQILKKMPQY-QKELNKYS---THL 347
Query: 422 DMYTTCLRDPVFWMIMKRVCNI 487
+ C++ F ++++C++
Sbjct: 348 HLADDCMKH--FKGSVEKLCSV 367
>AB002559-1|BAA19547.1| 579|Homo sapiens hunc18b2 protein.
Length = 579
Score = 29.9 bits (64), Expect = 9.0
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +2
Query: 242 RHCYSLKKSEDIENLARLVLGGLEIVGDDAKVIHLTNLMKKMLSYGQYNMDKYTYVPTSL 421
RH + S+ + L R + D A + L+ ++KKM Y Q ++KY+ T L
Sbjct: 292 RHMHIADVSKKVTELLRTFCESKRLTTDKANIKDLSQILKKMPQY-QKELNKYS---THL 347
Query: 422 DMYTTCLRDPVFWMIMKRVCNI 487
+ C++ F ++++C++
Sbjct: 348 HLADDCMKH--FKGSVEKLCSV 367
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,264,741
Number of Sequences: 237096
Number of extensions: 2159610
Number of successful extensions: 12637
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12632
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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