Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0142
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    26   0.22 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   4.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   6.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.4  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 210 WYSCSRYHCQSCILYCPAKF 269
           W SCS +  Q    YCP KF
Sbjct: 412 WLSCSSFFQQFFHCYCPIKF 431


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 596 YSE*IITSL-FLYLLCNIFLANPSHRF 519
           YS+  I SL F Y +CNIF   P + F
Sbjct: 6   YSKKDIRSLSFFYKICNIFGIVPPYSF 32


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 596 YSE*IITSL-FLYLLCNIFLANPSHRF 519
           YS+  I SL F Y +CNIF   P + F
Sbjct: 6   YSKKDIRSLSFFYKICNIFGIVPPYSF 32


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 70  WKVEHKLSDILLLTICAVISGA 135
           WK +  L     LTIC ++S A
Sbjct: 302 WKNDKSLKRKFYLTICTIMSAA 323


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 81  FHFPGLSVIGDNRNMFHQFFK 19
           F  PGLS +G   +M H++ K
Sbjct: 258 FAVPGLSPLGHTLSMNHKYEK 278


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 51  DNRNMFHQFF 22
           DN N FHQF+
Sbjct: 475 DNYNSFHQFY 484


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 51  DNRNMFHQFF 22
           DN N FHQF+
Sbjct: 423 DNYNSFHQFY 432


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 213 TIFKITILLQKIGMCFPKILYIF 145
           TIF I +++Q   + +  +LYIF
Sbjct: 614 TIFIICVIVQSEQIAWLHLLYIF 636


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,924
Number of Sequences: 336
Number of extensions: 3688
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)