Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0142
         (625 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127680-1|AAI27681.1|  624|Homo sapiens LOC91893 protein protein.     34   0.47 
BC006136-1|AAH06136.1|  625|Homo sapiens Unknown (protein for IM...    34   0.47 
BC028296-1|AAH28296.1|  388|Homo sapiens LPHN1 protein protein.        31   2.5  
AF307079-1|AAG27461.1| 1469|Homo sapiens lectomedin-2 protein.         31   2.5  
AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane hel...    31   2.5  
AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.     31   2.5  

>BC127680-1|AAI27681.1|  624|Homo sapiens LOC91893 protein protein.
          Length = 624

 Score = 33.9 bits (74), Expect = 0.47
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -1

Query: 601 PFTANK*SPPCFCIFSAISFWPTHRIGFDDFPLISSMLRSSGIAVISLDFLSVLICPMTR 422
           PF ++   PPC+     +SFW   + GFD+    +     S   +IS+ FLS    P T+
Sbjct: 525 PFKSHSLYPPCYV--HDVSFWIDQKKGFDELEFHTVARAVSQDTIISIQFLSRFQHPKTQ 582


>BC006136-1|AAH06136.1|  625|Homo sapiens Unknown (protein for
           IMAGE:3677165) protein.
          Length = 625

 Score = 33.9 bits (74), Expect = 0.47
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -1

Query: 601 PFTANK*SPPCFCIFSAISFWPTHRIGFDDFPLISSMLRSSGIAVISLDFLSVLICPMTR 422
           PF ++   PPC+     +SFW   + GFD+    +     S   +IS+ FLS    P T+
Sbjct: 526 PFKSHSLYPPCYV--HDVSFWIDQKKGFDELEFHTVARAVSQDTIISIQFLSRFQHPKTQ 583


>BC028296-1|AAH28296.1|  388|Homo sapiens LPHN1 protein protein.
          Length = 388

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 516 SKPMRWVGQKDIAEKIQKQGGDYLFAVKGNQGRL 617
           + P RW G+ DI   + + G   ++A +GN GRL
Sbjct: 257 TSPYRWGGKTDIDLAVDENGLWVIYATEGNNGRL 290


>AF307079-1|AAG27461.1| 1469|Homo sapiens lectomedin-2 protein.
          Length = 1469

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 516 SKPMRWVGQKDIAEKIQKQGGDYLFAVKGNQGRL 617
           + P RW G+ DI   + + G   ++A +GN GRL
Sbjct: 252 TSPYRWGGKTDIDLAVDENGLWVIYATEGNNGRL 285


>AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 1474

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 516 SKPMRWVGQKDIAEKIQKQGGDYLFAVKGNQGRL 617
           + P RW G+ DI   + + G   ++A +GN GRL
Sbjct: 257 TSPYRWGGKTDIDLAVDENGLWVIYATEGNNGRL 290


>AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.
          Length = 1566

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 516 SKPMRWVGQKDIAEKIQKQGGDYLFAVKGNQGRL 617
           + P RW G+ DI   + + G   ++A +GN GRL
Sbjct: 349 TSPYRWGGKTDIDLAVDENGLWVIYATEGNNGRL 382


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,658,211
Number of Sequences: 237096
Number of extensions: 1971386
Number of successful extensions: 4163
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4163
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)