Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0142
         (625 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003566-1|AAO39570.1| 1463|Drosophila melanogaster LP02166p pro...    29   6.8  
AE014297-1294|AAF54635.3| 2243|Drosophila melanogaster CG5270-PB...    29   6.8  
AY060881-1|AAL28429.1|   70|Drosophila melanogaster GM04226p pro...    28   8.9  
AF018078-1|AAB70303.1|  654|Drosophila melanogaster unknown prot...    28   8.9  
AE014134-1337|AAF52554.3|  678|Drosophila melanogaster CG7179-PA...    28   8.9  

>BT003566-1|AAO39570.1| 1463|Drosophila melanogaster LP02166p
           protein.
          Length = 1463

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 73  KVEHKLSDILLLTICAVISGAEGWEDIEDFGETHPDFL 186
           ++EH LSDI +    + +   E W    DFG   P+ +
Sbjct: 345 ELEHTLSDITIYARVSALLKFESWPQAYDFGRQTPNVI 382


>AE014297-1294|AAF54635.3| 2243|Drosophila melanogaster CG5270-PB,
            isoform B protein.
          Length = 2243

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 73   KVEHKLSDILLLTICAVISGAEGWEDIEDFGETHPDFL 186
            ++EH LSDI +    + +   E W    DFG   P+ +
Sbjct: 1125 ELEHTLSDITIYARVSALLKFESWPQAYDFGRQTPNVI 1162


>AY060881-1|AAL28429.1|   70|Drosophila melanogaster GM04226p
           protein.
          Length = 70

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = +1

Query: 250 CIVLRNFMRALLTGCLTTILQMIKTSSQLXEKYTGILMTRVAVRERFMSLVRSQQCTVWS 429
           C +L +  +  LTG     +  I++   L EKY  +L   V VR   +++ ++  CT+WS
Sbjct: 4   CFILYSQPQISLTGPRLVTITQIESIPAL-EKYVQLLYY-VRVRHVDVNVEKNNCCTLWS 61

Query: 430 S 432
           S
Sbjct: 62  S 62


>AF018078-1|AAB70303.1|  654|Drosophila melanogaster unknown
           protein.
          Length = 654

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 255 CPAKFHESFINWMLDYHSSDDKDVIAI 335
           CP KFH  F+++ L+   +  +D +AI
Sbjct: 67  CPTKFHIQFLDFKLELSENCSRDYLAI 93


>AE014134-1337|AAF52554.3|  678|Drosophila melanogaster CG7179-PA
           protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 255 CPAKFHESFINWMLDYHSSDDKDVIAI 335
           CP KFH  F+++ L+   +  +D +AI
Sbjct: 67  CPTKFHIQFLDFKLELSENCSRDYLAI 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,185,811
Number of Sequences: 53049
Number of extensions: 639221
Number of successful extensions: 1578
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)