Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0139
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118492-1|AAM49861.1|  190|Drosophila melanogaster LD05267p pro...   105   6e-23
AE014134-1722|AAF52827.1|  190|Drosophila melanogaster CG5885-PA...   105   6e-23

>AY118492-1|AAM49861.1|  190|Drosophila melanogaster LD05267p
           protein.
          Length = 190

 Score =  105 bits (252), Expect = 6e-23
 Identities = 48/84 (57%), Positives = 64/84 (76%)
 Frame = +1

Query: 256 RVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDK 435
           R+H++++  + I F+LVTAAST+L+A AY+N KFQLKH             ++R++ DDK
Sbjct: 54  RIHNMDLWPSSILFVLVTAASTYLMATAYKNIKFQLKHKIAGRREEAVTREVNRQVGDDK 113

Query: 436 KMSRKEKDERILWKKNEVADYEAT 507
           K++RKEKDERILWKKNEVADYEAT
Sbjct: 114 KVTRKEKDERILWKKNEVADYEAT 137



 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 42/50 (84%), Positives = 43/50 (86%), Gaps = 4/50 (8%)
 Frame = +2

Query: 116 SGKNNKA----FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLF 253
           SGK  K     FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSA+PIWLF
Sbjct: 3   SGKQQKVQSSGFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAVPIWLF 52



 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 27/65 (41%), Positives = 40/65 (61%)
 Frame = +3

Query: 435 KNEQKRKGRKNLVEKE*GGRL*SYQYSIFYNNALFLTIVILSSFYILRTFTPTVNYIVSL 614
           K  +K K  + L +K       +  +SIFYNNA++L ++I  SF+IL+  TP +NYI S+
Sbjct: 114 KVTRKEKDERILWKKNEVADYEATTFSIFYNNAIYLAVIIFISFFILKNSTPFINYIFSV 173

Query: 615 TAASG 629
             ASG
Sbjct: 174 GIASG 178


>AE014134-1722|AAF52827.1|  190|Drosophila melanogaster CG5885-PA
           protein.
          Length = 190

 Score =  105 bits (252), Expect = 6e-23
 Identities = 48/84 (57%), Positives = 64/84 (76%)
 Frame = +1

Query: 256 RVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDK 435
           R+H++++  + I F+LVTAAST+L+A AY+N KFQLKH             ++R++ DDK
Sbjct: 54  RIHNMDLWPSSILFVLVTAASTYLMATAYKNIKFQLKHKIAGRREEAVTREVNRQVGDDK 113

Query: 436 KMSRKEKDERILWKKNEVADYEAT 507
           K++RKEKDERILWKKNEVADYEAT
Sbjct: 114 KVTRKEKDERILWKKNEVADYEAT 137



 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 42/50 (84%), Positives = 43/50 (86%), Gaps = 4/50 (8%)
 Frame = +2

Query: 116 SGKNNKA----FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLF 253
           SGK  K     FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSA+PIWLF
Sbjct: 3   SGKQQKVQSSGFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAVPIWLF 52



 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 27/65 (41%), Positives = 40/65 (61%)
 Frame = +3

Query: 435 KNEQKRKGRKNLVEKE*GGRL*SYQYSIFYNNALFLTIVILSSFYILRTFTPTVNYIVSL 614
           K  +K K  + L +K       +  +SIFYNNA++L ++I  SF+IL+  TP +NYI S+
Sbjct: 114 KVTRKEKDERILWKKNEVADYEATTFSIFYNNAIYLAVIIFISFFILKNSTPFINYIFSV 173

Query: 615 TAASG 629
             ASG
Sbjct: 174 GIASG 178


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,326,753
Number of Sequences: 53049
Number of extensions: 598111
Number of successful extensions: 1357
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)