Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0137
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    26   0.25 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   1.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.6  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -2

Query: 568 QLIF*LATGRVFRSCSLT*QNVVVLQILFPVENNSFRLNFSVFNIHFV 425
           ++I   + G+V +S       +   +I       SFR+NF++FN++ V
Sbjct: 78  RIILVFSKGKVIKSFFNQGYELSKQEIFNCCSKKSFRMNFAIFNLYMV 125


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 645 TKLKKIFQMHKILL 686
           T +KK+F +HKIL+
Sbjct: 131 TTIKKLFNLHKILV 144


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
 Frame = +3

Query: 210 LVFHTNRGPIRF---NVWTQPDKRSLVVLETDTIFKDNVLSSCST*PLE-LRTKMYLTGX 377
           ++F+   G + F   N        ++ + E   +   N  ++ S      + T  Y+TG 
Sbjct: 73  VIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGNYANASSVGSRNPIHTSSYMTGI 132

Query: 378 EIWSVYVKVSLLSCAETKWILK 443
            +W + +  + +  A  K+  K
Sbjct: 133 WVWLINISATYICYAFGKFSCK 154


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
 Frame = +3

Query: 210 LVFHTNRGPIRF---NVWTQPDKRSLVVLETDTIFKDNVLSSCST*PLE-LRTKMYLTGX 377
           ++F+   G + F   N        ++ + E   +   N  ++ S      + T  Y+TG 
Sbjct: 306 VIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGNYANASSVGSRNPIHTSSYMTGI 365

Query: 378 EIWSVYVKVSLLSCAETKWILK 443
            +W + +  + +  A  K+  K
Sbjct: 366 WVWLINISATYICYAFGKFSCK 387


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
 Frame = +3

Query: 210 LVFHTNRGPIRF---NVWTQPDKRSLVVLETDTIFKDNVLSSCST*PLE-LRTKMYLTGX 377
           ++F+   G + F   N        ++ + E   +   N  ++ S      + T  Y+TG 
Sbjct: 306 VIFYCQEGSVDFLFDNFSAAFQDHNIEITEVAPVLPGNYANASSVGSRNPIHTSSYMTGI 365

Query: 378 EIWSVYVKVSLLSCAETKWILK 443
            +W + +  + +  A  K+  K
Sbjct: 366 WVWLINISATYICYAFGKFSCK 387


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -2

Query: 667 WKIFFNLVLPLRIHCNFWWQKGRPWQQTQGYRHQLIF 557
           W I + + + + I C   W     W Q + Y +  +F
Sbjct: 40  WYICYTIGVIITIGCLCIWSIFNKWNQFRSYSNFSVF 76


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 309 DNVLSSCST*PLELRTKMYL 368
           D  L+S    P+++RTK+YL
Sbjct: 107 DETLNSKPLKPVKIRTKVYL 126


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 309 DNVLSSCST*PLELRTKMYL 368
           D  L+S    P+++RTK+YL
Sbjct: 103 DETLNSKPLKPVKIRTKVYL 122


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = -3

Query: 426 FPHKTIGIPSHTRTKSLXQLGTFLYVTREVTSNMMIAHCP 307
           FP     +PS   T     +GTF  + +++   +   +CP
Sbjct: 633 FPQCGDYVPSGNSTVDCDDVGTFGAILKKLLPKVYEDYCP 672


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 313 LSLNIVSVSKTTKLLLSGCVHT 248
           L L + SVSK   L LSG V T
Sbjct: 377 LVLTVSSVSKPEALRLSGSVVT 398


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 87 AYHLPFSLFYCYFT 46
          A  L F LFYCY T
Sbjct: 12 AVFLLFYLFYCYKT 25


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
          monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 87 AYHLPFSLFYCYFT 46
          A  L F LFYCY T
Sbjct: 12 AVFLLFYLFYCYKT 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,514
Number of Sequences: 336
Number of extensions: 3965
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)