Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0137
(692 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 172 4e-44
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 62 7e-11
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 58 1e-09
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 53 3e-08
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 52 6e-08
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 51 2e-07
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 50 2e-07
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 50 2e-07
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 50 2e-07
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 49 6e-07
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 47 3e-06
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 46 5e-06
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 44 2e-05
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 42 8e-05
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 42 1e-04
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 42 1e-04
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 40 5e-04
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 36 0.004
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 29 0.64
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 28 1.5
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 27 1.9
SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|... 27 3.4
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 25 7.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.9
SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter ... 25 7.9
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 172 bits (419), Expect = 4e-44
Identities = 84/146 (57%), Positives = 96/146 (65%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCEGIPIVLCGNKV 433
DTAGQEK GGLRDGYYIQGQC IIMFDVTSR+TYKNVP+W RDLVRVCE IPIVLCGNKV
Sbjct: 64 DTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCGNKV 123
Query: 434 DIKDRKVKAKTIVFHRKKNLQYYDILLSQTTTSKNPSCG*LEN*LVTVTXXXXXXXXXXX 613
D+K+RKVKAK I FHRKKNLQYYDI + P +
Sbjct: 124 DVKERKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPNLEFVASPALAP 183
Query: 614 XEVTMDPQWQNQIEKDLPDAQNTALP 691
EV +D Q Q ++++ +A LP
Sbjct: 184 PEVQVDQQLLAQYQQEMNEAAAMPLP 209
Score = 112 bits (269), Expect = 5e-26
Identities = 51/66 (77%), Positives = 55/66 (83%)
Frame = +3
Query: 81 DMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWTQ 260
++PTFK VLVGDGGTGKTTFVKRHLTGEFEKKY+ATLGVEVHPL FHTN G I FNVW
Sbjct: 6 NVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDT 65
Query: 261 PDKRSL 278
+ L
Sbjct: 66 AGQEKL 71
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 62.1 bits (144), Expect = 7e-11
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVC-EGIPIVLCGNK 430
DTAGQE++ L YY CAI+++D+T + + +W ++L R EGI I L GNK
Sbjct: 70 DTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNK 129
Query: 431 VDI-KDRKV--KAKTIVFHRKKNLQYYD 505
+D+ ++R+ KA + + NL +++
Sbjct: 130 LDLAQERRAVEKADAEAYAAEANLLFFE 157
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 194
K VL+GD GK++ V R + +F+ +T+G
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIG 48
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 58.0 bits (134), Expect = 1e-09
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVR-VCEGIPIVLCGNK 430
DTAGQE+F + YY II++DVT + ++ NV W +++ R EG+ +L GNK
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNK 122
Query: 431 VDIKDRKV 454
D+ D+KV
Sbjct: 123 SDMVDKKV 130
Score = 40.7 bits (91), Expect = 2e-04
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
FK +L+GD G GK+ + R + + Y++T+GV+ F ++ +W
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIW 62
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 53.2 bits (122), Expect = 3e-08
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCEG--IPIVLCGN 427
DTAGQE+F L Y AII++D+T+ ++ N W D VR G + IVL GN
Sbjct: 66 DTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIED-VRAERGDDVIIVLVGN 124
Query: 428 KVDIKDRK 451
K D+ D++
Sbjct: 125 KTDLADKR 132
Score = 39.5 bits (88), Expect = 5e-04
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
FK V +G+ GKT+ + R + +F+ Y AT+G++ + +R +W
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 65
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 52.4 bits (120), Expect = 6e-08
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRD-LVRVC----EGIPIVL 418
DTAGQE+F L +Y C ++++DV + +++ + +W + L++ E P +L
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFIL 122
Query: 419 CGNKVDIKDRK---VKAKTIVF-HRKKNLQYYD 505
GNKVD++++K K+K + F + + Y++
Sbjct: 123 LGNKVDVEEQKRMVSKSKALAFCQARGEIPYFE 155
Score = 35.9 bits (79), Expect = 0.006
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 200
K +++G+ G GKT+ + +++ +F K Y AT+G +
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGAD 44
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 50.8 bits (116), Expect = 2e-07
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWXRDLVRVCEGIPIVLCGNK 430
DTAGQE + LR Y Q ++ F VTS +++NV W ++ C G+P ++ G +
Sbjct: 57 DTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQ 116
Query: 431 VDIKD 445
+D++D
Sbjct: 117 IDLRD 121
Score = 43.2 bits (97), Expect = 4e-05
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +3
Query: 84 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
MPT KCV+VGDG GKT + + T +F YV T+
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV 36
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCE-GIPIVLCGNK 430
DTAGQE++ + YY A+I++D+T + ++ NV W ++L + I I+L GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNK 124
Query: 431 VDI 439
D+
Sbjct: 125 TDL 127
Score = 37.9 bits (84), Expect = 0.001
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
FK VL+GD G GK+ + R EF + +T+GVE + I+ +W
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIW 64
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 50.4 bits (115), Expect = 2e-07
Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = +2
Query: 152 FDWRVREKIRCDSGCRSTSSSIPYEPRANSF*CVDTAGQEKFGGLRDGYYIQGQCAIIMF 331
+D +V + D R S + + + DTAGQEKF + YY A++++
Sbjct: 34 WDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVY 93
Query: 332 DVTSRVTYKNVPNWXRDLVRVCEG-IPIVLCGNKVDIKDRK 451
DVT++ +++ + +W D+ + I +VL G+K D+++++
Sbjct: 94 DVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQR 134
Score = 29.9 bits (64), Expect = 0.36
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRG----PIRFNVW 254
K VL G GTGK+ ++R + +++ + T+G++ + G I+ +W
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIW 67
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 50.4 bits (115), Expect = 2e-07
Identities = 21/73 (28%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Frame = +2
Query: 251 VDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRV--CEGIPIVLCG 424
+DTAGQE++ +R+ Y G+ ++++++TSR ++ + + + ++RV + P+VL
Sbjct: 61 LDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVA 120
Query: 425 NKVDIKDRKVKAK 463
NK D++ +V ++
Sbjct: 121 NKCDLEAERVVSR 133
Score = 29.1 bits (62), Expect = 0.64
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 93 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
+K V+VGDGG GK+ + + F +Y T+
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTI 41
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 49.2 bits (112), Expect = 6e-07
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVR-VCEGIPIVLCGNK 430
DTAGQE+F + YY ++++DVT + ++ NV W ++ + E + +L GNK
Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNK 123
Query: 431 VDIKDRK 451
D +D++
Sbjct: 124 CDCEDQR 130
Score = 34.3 bits (75), Expect = 0.017
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
K +L+GD G GK+ + R F ++ T+G++ + I+ +W
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 63
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 46.8 bits (106), Expect = 3e-06
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCE----GIPIVLC 421
DTAGQE+F L +Y C +I+++V + ++ +V NW ++ + P ++
Sbjct: 63 DTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIV 122
Query: 422 GNKVDIKDRKVKAKTI 469
GN++D KD +A ++
Sbjct: 123 GNQID-KDASKRAVSL 137
Score = 35.5 bits (78), Expect = 0.007
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 200
K V++GD G GKT + + + +F ++Y AT+G +
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGAD 44
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 46.0 bits (104), Expect = 5e-06
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WXRDLVRVCEGIPIVLCGNK 430
DTAGQE + LR Y +I F V + + NV W +++ C +PI+L G K
Sbjct: 60 DTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCK 119
Query: 431 VDIKD 445
VD+++
Sbjct: 120 VDLRN 124
Score = 29.1 bits (62), Expect = 0.64
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
K V+VGDG GKT + G F + YV T+
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV 39
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWXRDLVRVCEGIPIVLCGNK 430
DTAGQE++ LR Y + ++ F + S + +NV W ++ +C +P +L G K
Sbjct: 62 DTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMK 121
Query: 431 VDIKDRKV 454
D++ V
Sbjct: 122 ADLRSDPV 129
Score = 31.1 bits (67), Expect = 0.16
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
K V+VGDG GKT+ + G F +YV T+
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTV 41
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 41.9 bits (94), Expect = 8e-05
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWXRDLVRVCEGIPIVLCGNK 430
DTAGQE++ LR Y ++ F + + NV W ++ C PIVL G K
Sbjct: 70 DTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLK 129
Query: 431 VDI-KDR 448
D+ KDR
Sbjct: 130 ADLRKDR 136
Score = 34.7 bits (76), Expect = 0.013
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWTQPDKR 272
K V+VGDGG GKT + +G F ++YV T+ + + + N I +W +
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 273 SLVVLETDTIFKDNVLSSC 329
L + NV+ C
Sbjct: 76 EYDRLRPLSYPNSNVILLC 94
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 41.5 bits (93), Expect = 1e-04
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWXRDLVRVCEGIPIVLCGNK 430
DTAGQE + LR Y +I F V S + NV W +++ C +PI+L K
Sbjct: 60 DTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACK 119
Query: 431 VDIKD 445
D+++
Sbjct: 120 ADLRN 124
Score = 29.1 bits (62), Expect = 0.64
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 191
K V+VGDG GKT + G F + YV T+
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV 39
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWXRDLVRVCEGIPIVLCGNK 430
DTAGQE++ LR Y +I F V SR + +NV W ++ C G+ +VL K
Sbjct: 67 DTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALK 126
Query: 431 VDIK 442
D++
Sbjct: 127 CDLR 130
Score = 28.7 bits (61), Expect = 0.84
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +3
Query: 96 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWTQPDKR 272
K V++GDG GKT+ + G F + Y T+ +H + N I ++W +
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGN--SIELSLWDTAGQE 72
Query: 273 SLVVLETDTIFKDNVLSSC 329
L + + +V+ C
Sbjct: 73 EYDQLRSLSYSDTHVIMIC 91
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 39.5 bits (88), Expect = 5e-04
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 90 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWTQPDK 269
T K ++GD GKT+ + ++ G F+++ TLGV I F++W +
Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
Query: 270 RSLV 281
R V
Sbjct: 70 REFV 73
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = +2
Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVRVCEGIPIVLCGNKV 433
D GQ +F + + MFD++ + T ++ W R + +L G K
Sbjct: 65 DLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKY 124
Query: 434 D 436
D
Sbjct: 125 D 125
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 36.3 bits (80), Expect = 0.004
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +2
Query: 206 SSSIPYEPRANSF*CVDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDL 385
S +I Y+ + + +DTAGQ+++ L + I ++++ +TS+ +++ V RD
Sbjct: 44 SKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMV-KIVRDK 102
Query: 386 V---RVCEGIPIVLCGNKVDI 439
+ E +PIV+ GNK D+
Sbjct: 103 ILNHTGTEWVPIVVVGNKSDL 123
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 29.1 bits (62), Expect = 0.64
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 102 VLVGDGGTGKTTFVKR---HLTGEFEKKYVATLGVEVHPLVFHTN 227
++VG G+GKTTF+++ HL + + Y+ L V L + N
Sbjct: 12 IVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEAN 56
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 102 VLVGDGGTGKTTFVK 146
VL+G+ GTGKTTF K
Sbjct: 379 VLLGENGTGKTTFCK 393
>SPAC2G11.13 |atg22||autophagy associated protein Atg22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 27.5 bits (58), Expect = 1.9
Identities = 30/125 (24%), Positives = 57/125 (45%)
Frame = -2
Query: 490 ILFPVENNSFRLNFSVFNIHFVSAQDNRDTFTYTDQISXPVRYIFVRNSRGYVEHDDSTL 311
+ PVEN+S + ++ + + S +++ +F + IS ++F SR ++ T
Sbjct: 293 VTLPVENHS---SDAILTLLYNSVKESYHSFKHAMSISSIRLFLF---SRLFINCGIQT- 345
Query: 310 SLNIVSVSKTTKLLLSGCVHTLKRIGPRFVWNTRGCTSTPRVATYFFSNSPVKCLLTKVV 131
SL+ + +L LS TL +G + G P + YF NS ++ ++
Sbjct: 346 SLSSAVIFGKARLNLSNFQLTLLGMGISS-FALLGTVIIPYLTEYFQLNSLQVVMIISIL 404
Query: 130 LPVPP 116
LP+ P
Sbjct: 405 LPMAP 409
>SPAC23A1.16c |||DUF408 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 218 PYEPRANSF*CVDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVR 391
PYEP+ + ++ +G + +GGL YY C + V + P W R+ R
Sbjct: 89 PYEPKQQTRYKLEDSGMKVYGGL--NYYCSKDC--FLKSCQYMVELSDEPLWIREDAR 142
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 290 DGYYIQGQCAIIMFDVTSRVTYKNVP 367
D Y G+C+ M +++ V YKN P
Sbjct: 53 DSRYADGRCSAAMRSLSNYVLYKNNP 78
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 99 CVLVGDGGTGKTTFVK 146
C+LVGD TGKT ++
Sbjct: 1872 CILVGDTATGKTCILR 1887
>SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter
Str2 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 597
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 325 DDSTLSLNIVSVSKTTKLLLSGCVHTLKRIG 233
D S+L+LN+ S TT +LSG + +KR G
Sbjct: 386 DMSSLTLNVFVFSMTTTAILSGFL--MKRFG 414
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,082,077
Number of Sequences: 5004
Number of extensions: 66425
Number of successful extensions: 281
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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