Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0137
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            51   3e-08
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    48   4e-07
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      25   2.3  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       24   5.2  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   6.9  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   9.1  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +2

Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWXRDLVR-VCEGIPIVLCGNK 430
           DTAGQE++  L   YY   Q AI+++D+ +  ++     W ++L R     I I L GNK
Sbjct: 79  DTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNK 138

Query: 431 VDIKDRKV 454
            D+ + +V
Sbjct: 139 ADLANSRV 146



 Score = 35.9 bits (79), Expect = 0.001
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +3

Query: 93  FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 254
           FK VL+G+   GK++ V R + G+F +   +T+G          +   ++F +W
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIW 78


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 47.6 bits (108), Expect = 4e-07
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +2

Query: 254 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WXRDLVRVCEGIPIVLCGNK 430
           DTAGQE +  LR   Y Q    +I + V S  +++NV + W  ++   C   PI+L G K
Sbjct: 60  DTAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTK 119

Query: 431 VDIKD 445
           +D+++
Sbjct: 120 IDLRE 124



 Score = 34.3 bits (75), Expect = 0.004
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 96  KCVLVGDGGTGKTTFVKRHLTGEFEKKYVAT 188
           KCV+VGDG  GKT  +  + T  F  +YV T
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPT 38


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +3

Query: 96  KCVLVGDGGTGKTTFVKR 149
           K +L+G G +GK+TF+K+
Sbjct: 35  KLLLLGTGESGKSTFIKQ 52


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 147 RHLTGEFEKKYVATLGVEVHPLV 215
           RH++G+F + YV TL     PL+
Sbjct: 119 RHMSGDFPRDYVDTLKQLRSPLL 141


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 201 VHPLVFHTNRGPI 239
           VHPL FH   GPI
Sbjct: 187 VHPLAFHPIGGPI 199


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 612 GRRAGHGNKLKVTVT 568
           GR+  HG KLKV V+
Sbjct: 269 GRKFAHGTKLKVCVS 283


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,585
Number of Sequences: 2352
Number of extensions: 17535
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)