Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0135
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058450-1|AAL13679.1|  496|Drosophila melanogaster GH24265p pro...    29   5.6  
AL009194-5|CAA15700.1|  496|Drosophila melanogaster EG:152A3.6,F...    29   5.6  
AE014298-352|AAF45742.1|  496|Drosophila melanogaster CG10755-PA...    29   5.6  

>AY058450-1|AAL13679.1|  496|Drosophila melanogaster GH24265p
           protein.
          Length = 496

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 466 KTIQYKVNRKCCQGHEQCNLACSFCFIVLSRYRCDAIFSSLVNE 335
           K I+ +VN    +GH+    A SFC  +LSR+  +A+   L  E
Sbjct: 292 KQIRDEVNTFIFEGHDTTTSAVSFCLYLLSRH--EAVQQKLFEE 333


>AL009194-5|CAA15700.1|  496|Drosophila melanogaster
           EG:152A3.6,FBgn0015036;Cyp4e4 protein.
          Length = 496

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 466 KTIQYKVNRKCCQGHEQCNLACSFCFIVLSRYRCDAIFSSLVNE 335
           K I+ +VN    +GH+    A SFC  +LSR+  +A+   L  E
Sbjct: 292 KQIRDEVNTFIFEGHDTTTSAVSFCLYLLSRH--EAVQQKLFEE 333


>AE014298-352|AAF45742.1|  496|Drosophila melanogaster CG10755-PA
           protein.
          Length = 496

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 466 KTIQYKVNRKCCQGHEQCNLACSFCFIVLSRYRCDAIFSSLVNE 335
           K I+ +VN    +GH+    A SFC  +LSR+  +A+   L  E
Sbjct: 292 KQIRDEVNTFIFEGHDTTTSAVSFCLYLLSRH--EAVQQKLFEE 333


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,424,675
Number of Sequences: 53049
Number of extensions: 366050
Number of successful extensions: 619
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)