Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0134
(676 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 148 5e-36
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 136 2e-32
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 120 1e-27
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 32 0.37
SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06) 30 1.5
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06) 30 1.5
SB_49603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_59386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8) 29 2.6
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 29 3.4
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_1431| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 28 6.0
SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26) 28 6.0
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 28 7.9
SB_3809| Best HMM Match : DUF1014 (HMM E-Value=8.7e-09) 28 7.9
SB_35587| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 148 bits (358), Expect = 5e-36
Identities = 68/81 (83%), Positives = 76/81 (93%)
Frame = +3
Query: 12 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 191
GIPPAPRGVPQIEVTFDIDANGILNVSA++KST KENKITITNDKGRLSKE+IERMVNEA
Sbjct: 465 GIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVNEA 524
Query: 192 EKYRNEDDKQKETIQAKNALE 254
KY+ ED+KQ++ IQ KN+LE
Sbjct: 525 SKYKEEDEKQRDRIQTKNSLE 545
Score = 104 bits (249), Expect = 8e-23
Identities = 43/69 (62%), Positives = 59/69 (85%)
Frame = +2
Query: 254 TYCFSMKSTMEDEKLKEKISDSDKQTILDKCNXTIKWLDSNQLADKEEYEHKQKELEGIY 433
+Y +SMKST+ED+K+K+KIS+ DK+ ILDKC +KWLD+NQ A+K+E+E+ QKELE +
Sbjct: 546 SYAYSMKSTVEDDKVKDKISEEDKKAILDKCTEVLKWLDTNQTAEKDEFEYHQKELEKVC 605
Query: 434 NPIITKMYQ 460
NPIITK+YQ
Sbjct: 606 NPIITKLYQ 614
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 136 bits (330), Expect = 1e-32
Identities = 62/82 (75%), Positives = 75/82 (91%)
Frame = +3
Query: 9 AGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNE 188
+GIPPAPRGVPQI+VTFD+D+NGILNVSA++KST KENKITITNDKGRLSKE+IERMV E
Sbjct: 556 SGIPPAPRGVPQIDVTFDVDSNGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVKE 615
Query: 189 AEKYRNEDDKQKETIQAKNALE 254
AEK++ D+ +E IQ+KN+LE
Sbjct: 616 AEKFKAADEAVRERIQSKNSLE 637
Score = 96.7 bits (230), Expect = 2e-20
Identities = 39/69 (56%), Positives = 56/69 (81%)
Frame = +2
Query: 254 TYCFSMKSTMEDEKLKEKISDSDKQTILDKCNXTIKWLDSNQLADKEEYEHKQKELEGIY 433
+Y FSMKSTMEDEK+K+K+S+ +++ ++ +C T+ WL+ NQ A+KEE + QKELEG+
Sbjct: 638 SYAFSMKSTMEDEKVKDKLSEDEREKVISRCKATLDWLEHNQSAEKEEIDAHQKELEGVC 697
Query: 434 NPIITKMYQ 460
NPIITK+YQ
Sbjct: 698 NPIITKLYQ 706
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 136 bits (328), Expect = 2e-32
Identities = 63/82 (76%), Positives = 73/82 (89%)
Frame = +3
Query: 9 AGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNE 188
+GIPPAPRGVPQIEVTFDIDANGILNVSA +KST K ITITNDKGRLSKEEI+RM+N+
Sbjct: 463 SGIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSKEEIDRMIND 522
Query: 189 AEKYRNEDDKQKETIQAKNALE 254
AEKY++ED+ Q+E I A+N LE
Sbjct: 523 AEKYKSEDEAQREKIAARNRLE 544
Score = 69.3 bits (162), Expect = 3e-12
Identities = 27/68 (39%), Positives = 47/68 (69%)
Frame = +2
Query: 254 TYCFSMKSTMEDEKLKEKISDSDKQTILDKCNXTIKWLDSNQLADKEEYEHKQKELEGIY 433
+Y F +KS + + L+ K+S SDK T+ +K + WL+ N LA+KEE+E ++KEL+ +
Sbjct: 545 SYAFGVKSAISEPSLEGKLSQSDKDTVKNKVEEVLNWLEKNSLAEKEEFEEQEKELQRVC 604
Query: 434 NPIITKMY 457
+PI+ K++
Sbjct: 605 SPIMAKVH 612
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 120 bits (288), Expect = 1e-27
Identities = 55/81 (67%), Positives = 67/81 (82%)
Frame = +3
Query: 12 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 191
GIPPAPRGVPQIEVTF+ID NGIL VSA +K T + KITITND+ RL+ E+IERMVN+A
Sbjct: 1158 GIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNKEKITITNDQNRLTPEDIERMVNDA 1217
Query: 192 EKYRNEDDKQKETIQAKNALE 254
EK+ +ED K KE ++A+N LE
Sbjct: 1218 EKFADEDKKTKEKVEARNELE 1238
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/63 (34%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +2
Query: 254 TYCFSMKSTMED-EKLKEKISDSDKQTILDKCNXTIKWLDSNQLADKEEYEHKQKELEGI 430
+Y +S+K+ + D EKL K+S+ DK+TI + I W+D NQ A E+++ ++++ + +
Sbjct: 1239 SYAYSLKNQVGDKEKLGGKLSEDDKKTITEAVEKAISWMDKNQDASVEDFKKEKRKWKML 1298
Query: 431 YNP 439
Y+P
Sbjct: 1299 YSP 1301
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/80 (61%), Positives = 59/80 (73%)
Frame = +3
Query: 12 GIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEA 191
GIPPAPRGVPQ+EVTFDIDANGI+NVSA +K T +E +I I G LSK+ IE M+ EA
Sbjct: 269 GIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGREQQIVI-QSSGGLSKDAIENMIKEA 327
Query: 192 EKYRNEDDKQKETIQAKNAL 251
EKY E DKQK+ + K +
Sbjct: 328 EKYA-EADKQKKVEKLKEEI 346
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +3
Query: 93 AIEKSTNKENKITITNDKGRLSKEEIER--MVNEAEKYRNEDDKQKETIQAKNA 248
A +K+T+K + ITN G++ KEE +R V E++K K++E I+ K A
Sbjct: 1132 AEQKATSKLQEEEITNAMGKIEKEEAKRKAAVEESQKAIEAARKKQEEIRQKQA 1185
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 99 EKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALE 254
+K+ + NKI + N+ + SKE++ER V AE + R+ D + K +++LE
Sbjct: 1031 DKTRRQLNKILVENENLKGSKEDLERRVVVAENRLRDTDSEMKGWRDIRSSLE 1083
>SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 699
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 269 MKSTMEDEKLKEKISDSDKQTILDKCNXTIKW-LDSNQLADKEEYEHKQKELEGIYNPII 445
+++ + EK K + D +++ L + T+K+ LD +LA KE++ +KE EG +
Sbjct: 100 VENDRDSEKHKRDLRDKEQE--LSELRKTVKYALDQEKLA-KEQFGDLKKEFEGYKKKMD 156
Query: 446 TKM 454
TKM
Sbjct: 157 TKM 159
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Frame = +2
Query: 266 SMKSTMEDEKLKEKISDSDKQTILDKCNXTIKWLDSN------QLADK-EEYEHKQKELE 424
S K ++ +K ++ D +K+ +++C TIK LDSN Q+AD+ EE + ++ELE
Sbjct: 174 SNKLVVDLQKTRKAQDDCEKE--VNRCEATIKTLDSNLKDLRQQVADRDEELNNNRQELE 231
Query: 425 GI 430
+
Sbjct: 232 SV 233
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 31.5 bits (68), Expect = 0.64
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 53 HLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 160
H +H+ ++ Q+ +Y++ HQ Q H Q+Q+ Q
Sbjct: 291 HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQ 326
>SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 69 ANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 248
+ I+ EK N EN++ K KEE+ + E+++ +K K+ ++ KN
Sbjct: 165 SKSIIEKMKTEKK-NLENEVASLKLKQETIKEEVVEEIEGDEEFQKLQNKYKQVVEEKNT 223
Query: 249 LE 254
L+
Sbjct: 224 LQ 225
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 132 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 254
+ +K RL EE+ER+ E +K E+ K++ET++ K L+
Sbjct: 277 LEEEKKRL--EELERLKEEKDKMLEEELKKRETLEEKQKLQ 315
>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
Length = 348
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 42 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 221
++E+ I+ L A ++ ++T D G + EE++R+ NE EK +NE
Sbjct: 99 EVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNEISDL 158
Query: 222 KETIQAKN 245
+ K+
Sbjct: 159 NSKLNTKS 166
>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
Length = 364
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 42 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 221
++E+ I+ L A ++ ++T D G + EE++R+ NE EK +NE
Sbjct: 99 EVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNEISDL 158
Query: 222 KETIQAKN 245
+ K+
Sbjct: 159 NSKLNTKS 166
>SB_49603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 96 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 218
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 66 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 106
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 96 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 218
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 78 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 118
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 96 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 218
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 90 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 130
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 96 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 218
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 102 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 142
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 96 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 218
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 114 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 154
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 96 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 218
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 126 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 166
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 NVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQ-AKNALE 254
NV A+E+S K + ++ + E+I+ + EAE+ E ++ E +Q KNALE
Sbjct: 1268 NVKAVEESNEKITSLKALINQKDDALEKIKASLKEAEERFQELNRTLEEVQKEKNALE 1325
>SB_59386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1037
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 135 TNDKGRLSKEEIERMVNEAEKY-RNEDDKQKETIQAKNALELTAS 266
TND G S +E E VN ++K NE++ + E ++ +N++E S
Sbjct: 888 TNDNGS-STDEAESEVNNSDKEGENEENDEVEDMEVENSIECKLS 931
>SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8)
Length = 82
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 272 KSTMEDEKLKEKISDSDKQTILDKCNXTIKWLDSNQLADKEEYEHKQKEL 421
K T ED++ ++K ++SD Q + N T K +L + +E K+ EL
Sbjct: 33 KVTQEDQEPEKKSNESDPQKDQETDNKTSKKESQEELREADETPKKKDEL 82
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 284 EDEKLKEKISDSDKQTILDKCNXTIKWLDSNQLADKEEYEHKQKELE 424
E E +KE + +++++ KC T K LD+++ D+E+ E Q+E E
Sbjct: 1077 EHETMKESLLNANREIGRLKCENTAKNLDADRKEDQED-EEVQREGE 1122
>SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1615
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 248 IGTYCFSMKSTMEDEKLKEKISDSDKQTILDKCNXTIKWLDSNQLADKEEY-EHKQKELE 424
IG+Y K + EK KEK + +K+ ILD K++ N + E+ E + ELE
Sbjct: 1097 IGSYKSCPKLRKKREKEKEKDKEKEKEVILD-FEALDKFIGRNPMTQIAEFREAEAAELE 1155
Query: 425 GI 430
I
Sbjct: 1156 AI 1157
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 141 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 248
++ + KEE ER+ EAE+ R ED++Q+ + + A
Sbjct: 411 EEEKRQKEEEERLRVEAERQREEDERQRAEDERQRA 446
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 141 DKGRLSKEEIERMVNEAEKYRNEDDKQKE 227
DK +L KEE E+ + E NE KQKE
Sbjct: 1606 DKYQLEKEEAEKRLQSYEDELNEKQKQKE 1634
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 266 SMKSTMEDEKLKEKISDSDKQTILDKCNXTIKWLDSNQLADKEEYEHKQ 412
S++ ++ E+ EK ++T D+ N TI +L+ EE++HK+
Sbjct: 1684 SVREALDSER--EKWRKEYEKTTQDEINKTISYLEDQYTRGLEEFKHKE 1730
>SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 914
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 251 GTYCFSMKSTMEDEKLKEKISDSDKQTILDKCNXT 355
G+ + +S EDEK+ SDS+ + LD C+ T
Sbjct: 250 GSLFNTSRSASEDEKISLHFSDSEGSSSLDHCSLT 284
>SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 87 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK---YRNEDDKQKETIQAK 242
V IEK + K I + KEEIE ++ EK EDD +KE I +
Sbjct: 145 VEEIEKREDANEKEEIEEREDANEKEEIEEREDDNEKEEIEEREDDNEKEEIDER 199
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 65 RCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRD 169
R QRY + + RE HQ+G HH R S + RD
Sbjct: 134 RDQRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRD 167
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 71 QRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDR 172
QR QR R R+ H+Q ++ QRQR + R R
Sbjct: 36 QRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQR 69
>SB_1431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1748
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 535 PRGRHLRLRFSAREARHTSGDSSGTLVHLR 446
P GRHL +RF + ARH GD S +V R
Sbjct: 1249 PEGRHLPVRFVGKCARH--GDESSIVVRDR 1276
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +2
Query: 227 DHPGQECIGTYCFSMKSTMEDEKLKEKISDSDKQTILDKCNXTIKWLDSNQLADKEEYEH 406
D P + Y + ++ EKLKE I D K +LD+ ++W+ + ++ +
Sbjct: 847 DPPSISALDLYVLIPPANIK-EKLKEDIHDPHK--VLDRVKYRVEWVKHQEKEKQKLEDE 903
Query: 407 KQKE 418
++KE
Sbjct: 904 REKE 907
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 84 NVSAIEKSTNKENKITITNDKGRLSKE-EIERMVN---EAEKYRNEDDKQKET 230
N+ + EK+ +K+ +TN++ SKE ++ N E + +N DD+Q++T
Sbjct: 46 NLDSEEKTEDKQTASDLTNEENAESKEITADQPTNNELETDNAQNVDDQQQQT 98
>SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26)
Length = 436
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 2 GTSRDPTGAA-WRASN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 160
G +R G WR N GH++ R Q P +Y+ + + + H QR L+
Sbjct: 235 GNNRGRGGRGRWRRQNHGHIQSRTQVQPSSQQYKTLPSE-QSSPHKMSQREPLK 287
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 83 QRFRYREVHQQGEQD-HHYQRQRSSLQGRDRAYG**GREVQKRG*QAKGDHPG 238
+R+R R+V Q+GE++ H+Q + + D R+V +RG + + HPG
Sbjct: 200 RRYRTRQVSQRGERERRHHQEWQYAATVLD-------RQVSERGKRERRHHPG 245
>SB_3809| Best HMM Match : DUF1014 (HMM E-Value=8.7e-09)
Length = 265
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 141 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 248
+K R +EE +++ + +K+ ++ K+ E ++ KNA
Sbjct: 50 EKERKEREEEDKLWEDDDKHEQQEKKRLEALERKNA 85
>SB_35587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 550 GQRLQ-PRGRHLRLRFSAREARHTSGDSSGTLVHLR 446
G+ LQ P+GR L +RF + ARH GD S +V R
Sbjct: 540 GEDLQYPKGRDLAVRFVGKCARH--GDESSIVVRDR 573
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,946,098
Number of Sequences: 59808
Number of extensions: 338230
Number of successful extensions: 1886
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1879
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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