Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0133
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.78 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +1

Query: 565 YCKNLCFSILFSECTTTFYK---LLNRVFTFMYLYRMFS 672
           YC  + F++ F  CT  FY    +L  V+ F Y + +F+
Sbjct: 86  YCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFT 124


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 325 QLKSLFHFFSSFCLVFWYNFSWFRT 251
           +LK +  FFS  C++F+    W +T
Sbjct: 5   ELKRVLFFFSFCCILFFIYLYWQQT 29


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +2

Query: 536 NFISNKVHQFIVRIYVLVFY-FLSALPRFINC*TGFLHSCTYIECFHISSL 685
           NF + K+ QFIVR     F+  L    +  +   G        +C+H+  +
Sbjct: 73  NFATKKLEQFIVRFMKYHFFGTLKLWSQLFSTFAGIEVLHVVKQCYHLQKI 123


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 306 TFLAASVWCSGTILVGSE 253
           TF+AA V+CS T    SE
Sbjct: 45  TFVAALVYCSVTFFALSE 62


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +1

Query: 511 LKETTIHYKFHLE*SAPIYCKNLCFSILFSECTTTFYKLLNRVFTFMYLYR 663
           +K  T++    +  SAPI    L   IL       F KLL  ++T  Y ++
Sbjct: 80  MKNVTLNDVVFIFCSAPIIITILDIEILGYVNKAKFGKLLINLYTINYNFK 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,965
Number of Sequences: 336
Number of extensions: 2598
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)