Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0132
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    61   9e-10
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    61   9e-10
Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    60   2e-09
X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    54   1e-07
Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical pr...    53   2e-07
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    53   2e-07
U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical pr...    48   9e-06
Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical pr...    42   6e-04
Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical pr...    36   0.021
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki...    29   4.3  
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr...    29   4.3  

>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = +2

Query: 8   STIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
           +T+ C   I K EG S+ FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 268 NTLDCAVKIIKNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = +2

Query: 8   STIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
           +T+ C   I K EG S+ FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 268 NTLDCAVKIIKNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313


>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = +2

Query: 8   STIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
           +T+ C   I + EG S+ FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 255 NTLDCAKKIIQNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300


>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 44  EGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
           EG S+ FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 267 EGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300


>Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical
           protein R07E3.4 protein.
          Length = 298

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 21/47 (44%), Positives = 30/47 (63%)
 Frame = +2

Query: 5   TSTIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
           TST  CW T+ K +G + F++GA +N LR TGGA ++  Y E  K +
Sbjct: 252 TSTKDCWKTLYKKDGINGFYRGALTNSLRSTGGALIITFYYEFSKYM 298


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 22/46 (47%), Positives = 31/46 (67%)
 Frame = +2

Query: 8   STIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
           +T+ C   I K EG ++ +KG  SNV R TGGA VL +YDEI+ ++
Sbjct: 255 NTLDCVRKIVKNEGITALYKGGLSNVFRATGGALVLTIYDEIQHLI 300


>U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical
           protein F25B4.7 protein.
          Length = 306

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = +2

Query: 8   STIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
           +TI C   I   EG  +FF GA  N +RGTG A VL +Y+E++K +
Sbjct: 261 NTISCIKYIYTKEGPKAFFHGALVNAIRGTGAALVLAIYNELQKYM 306


>Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical
           protein C47E12.2 protein.
          Length = 306

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +2

Query: 32  IAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKK 139
           I   EG    +KGA +N+ R  GGA V+ LY+EI K
Sbjct: 269 IVHEEGVRGLYKGALANIFRSAGGALVMALYEEIHK 304


>Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical
           protein R11.1 protein.
          Length = 289

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +2

Query: 5   TSTIHCWATIAKTEGTSSFFKGAFSNVLR-GTGGAFVLVLYDEI 133
           + T+   + + K EG  + +KG    V+R G GGA +L++YDE+
Sbjct: 238 SGTMQTISLVYKEEGFGALYKGLLPKVMRLGPGGAVMLIVYDEV 281


>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
           protein F46C3.1 protein.
          Length = 1077

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -2

Query: 404 FSF*MKKRLYNMKAIEMSKLEKFTSVRTSNYVTLNKTINYG 282
           FS   KKRL   + I  S LE FTS R +N   + K I +G
Sbjct: 574 FSNDEKKRLLRNRTISRSSLEGFTS-RFANEFEVKKVIGHG 613


>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
           protein F46C3.1 protein.
          Length = 1077

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -2

Query: 404 FSF*MKKRLYNMKAIEMSKLEKFTSVRTSNYVTLNKTINYG 282
           FS   KKRL   + I  S LE FTS R +N   + K I +G
Sbjct: 574 FSNDEKKRLLRNRTISRSSLEGFTS-RFANEFEVKKVIGHG 613


>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
           kinase protein.
          Length = 1077

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -2

Query: 404 FSF*MKKRLYNMKAIEMSKLEKFTSVRTSNYVTLNKTINYG 282
           FS   KKRL   + I  S LE FTS R +N   + K I +G
Sbjct: 574 FSNDEKKRLLRNRTISRSSLEGFTS-RFANEFEVKKVIGHG 613


>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
           translation initiationfactor 2 alpha kinase PEK protein.
          Length = 1077

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -2

Query: 404 FSF*MKKRLYNMKAIEMSKLEKFTSVRTSNYVTLNKTINYG 282
           FS   KKRL   + I  S LE FTS R +N   + K I +G
Sbjct: 574 FSNDEKKRLLRNRTISRSSLEGFTS-RFANEFEVKKVIGHG 613


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,405,399
Number of Sequences: 27780
Number of extensions: 272257
Number of successful extensions: 502
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)