Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0132
(702 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56450.1 68418.m07046 mitochondrial substrate carrier family ... 60 1e-09
At4g28390.1 68417.m04063 ADP, ATP carrier protein, mitochondrial... 44 1e-04
At5g13490.1 68418.m01556 ADP, ATP carrier protein 2, mitochondri... 42 3e-04
At3g08580.2 68416.m00996 ADP, ATP carrier protein 1, mitochondri... 42 5e-04
At3g08580.1 68416.m00995 ADP, ATP carrier protein 1, mitochondri... 42 5e-04
At5g17400.1 68418.m02041 ADP, ATP carrier protein, mitochondrial... 39 0.003
At5g58970.1 68418.m07387 uncoupling protein (UCP2) identical to ... 38 0.009
At5g66380.1 68418.m08370 mitochondrial substrate carrier family ... 31 0.98
At1g34065.1 68414.m04223 mitochondrial substrate carrier family ... 29 3.9
At5g52780.1 68418.m06550 expressed protein similar to unknown pr... 28 5.2
At4g32400.1 68417.m04613 mitochondrial substrate carrier family ... 27 9.1
At3g54110.1 68416.m05982 plant uncoupling mitochondrial protein ... 27 9.1
At1g79420.1 68414.m09255 expressed protein contains Pfam profile... 27 9.1
>At5g56450.1 68418.m07046 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 330
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = +2
Query: 8 STIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
ST+ CW I ++EG +SF++GA SN+ R TG A +LV YDE+K+ L
Sbjct: 280 STLDCWKKIYRSEGLASFYRGALSNMFRSTGSAAILVFYDEVKRFL 325
>At4g28390.1 68417.m04063 ADP, ATP carrier protein, mitochondrial,
putative / ADP/ATP translocase, putative / adenine
nucleotide translocator, putative similar to
mitochondrial ADP,ATP carrier protein SP:P12857 from
[Zea mays]
Length = 379
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +2
Query: 8 STIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
S++ ++ I K EG S FKGA +N+LR GA VL YD+++ ++
Sbjct: 324 SSLQAFSQIVKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIV 369
>At5g13490.1 68418.m01556 ADP, ATP carrier protein 2, mitochondrial
/ ADP/ATP translocase 2 / adenine nucleotide
translocator 2 (ANT2) identical to SWISS-PROT:P40941
ADP,ATP carrier protein 2, mitochondrial precursor
(Adenine nucleotide translocator 2) [Arabidopsis
thaliana]
Length = 385
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +2
Query: 8 STIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
S+ ++ I K EG S FKGA +N+LR GA VL YD+++ ++
Sbjct: 330 SSFDAFSQIVKKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIV 375
>At3g08580.2 68416.m00996 ADP, ATP carrier protein 1, mitochondrial
/ ADP/ATP translocase 1 / adenine nucleotide
translocator 1 (ANT1) identical to SWISS-PROT:P31167
ADP,ATP carrier protein 1 (Adenine nucleotide
translocator 1) [Arabidopsis thaliana]
Length = 381
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +2
Query: 8 STIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
S++ + I K EG S FKGA +N+LR GA VL YD+++ ++
Sbjct: 326 SSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIV 371
>At3g08580.1 68416.m00995 ADP, ATP carrier protein 1, mitochondrial
/ ADP/ATP translocase 1 / adenine nucleotide
translocator 1 (ANT1) identical to SWISS-PROT:P31167
ADP,ATP carrier protein 1 (Adenine nucleotide
translocator 1) [Arabidopsis thaliana]
Length = 381
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +2
Query: 8 STIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
S++ + I K EG S FKGA +N+LR GA VL YD+++ ++
Sbjct: 326 SSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIV 371
>At5g17400.1 68418.m02041 ADP, ATP carrier protein, mitochondrial,
putative / ADP/ATP translocase, putative / adenine
nucleotide translocator, putative similar to
SWISS-PROT:Q09188 ADP,ATP carrier protein (ADP/ATP
translocase) [Schizosaccharomyces pombe]; contains Pfam
profile: PF00153 mitochondrial carrier protein
Length = 306
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 8 STIHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKV 142
+TIH I K+EG + ++G +N+L G GA VL YD++ ++
Sbjct: 255 NTIHALREILKSEGFYALYRGVTANMLLGVAGAGVLAGYDQLHQI 299
>At5g58970.1 68418.m07387 uncoupling protein (UCP2) identical to
uncoupling protein GI:4063007 from [Arabidopsis
thaliana]
Length = 305
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 8 STIHCWATIAKTEGTSSFFKGAFSNVLR-GTGGAFVLVLYDEIKKV 142
+T+ C+ KTEG +F+KG N R GT A + + +++KKV
Sbjct: 252 NTVDCFIKTMKTEGIMAFYKGFLPNFTRLGTWNAIMFLTLEQVKKV 297
>At5g66380.1 68418.m08370 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 308
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 14 IHCWATIAKTEGTSSFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 145
+ + TI K EG + +KG ++ + GA Y+E++K++
Sbjct: 150 LDAFRTIVKEEGPRALYKGIVPGLVLVSHGAIQFTAYEELRKII 193
>At1g34065.1 68414.m04223 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 327
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 20 CWATIAKTEGTSSFFKGAFSNVL-RGTGGAFVLVLYDEIKKVL 145
C TI + EG+S+ +KG VL G GG+ + ++ K++L
Sbjct: 275 CIKTIIREEGSSALWKGMGPRVLWIGIGGSIFFGVLEKTKQIL 317
>At5g52780.1 68418.m06550 expressed protein similar to unknown
protein (pir||T04431)
Length = 168
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 691 LPNHMILPFNSIMCTEVKNTLHNYVNSLPLCKKKWK 584
L +H +LP +S+ T VK HN P K +W+
Sbjct: 5 LCSHRLLPLSSLSRTTVKTKSHNPKTLYPNNKPRWE 40
>At4g32400.1 68417.m04613 mitochondrial substrate carrier family
protein
Length = 392
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 2 GTSTIHCWATIAKTEGTSSFFKGAFSNVLR-GTGGAFVLVLYDEIKKVL 145
G S+ ++ I K EG + F+G NV+R A L +++ + K L
Sbjct: 144 GNSSTEVFSDIMKHEGWTGLFRGNLVNVIRVAPARAVELFVFETVNKKL 192
>At3g54110.1 68416.m05982 plant uncoupling mitochondrial protein
(PUMP) identical to plant uncoupling mitochondrial
protein [Arabidopsis thaliana] GI:3115108
Length = 306
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 11 TIHCWATIAKTEGTSSFFKGAFSNVLR-GTGGAFVLVLYDEIKK 139
TI C+ K++G +F+KG N R G+ + + ++ KK
Sbjct: 252 TIDCFVKTLKSDGPMAFYKGFIPNFGRLGSWNVIMFLTLEQAKK 295
>At1g79420.1 68414.m09255 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 417
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 13 HPLLGYHCQDRGNLVLLQGSLLQR 84
H L GY CQ G LV L+ S L R
Sbjct: 292 HALYGYFCQKSGLLVYLEDSHLTR 315
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,212,389
Number of Sequences: 28952
Number of extensions: 240763
Number of successful extensions: 471
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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