Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0131
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021400-1|AAX33548.1| 1098|Drosophila melanogaster LD13667p pro...    29   7.7  
AF222744-1|AAG44254.1| 1098|Drosophila melanogaster RanBP16 prot...    29   7.7  
AE014298-2289|AAF48541.3| 1098|Drosophila melanogaster CG33180-P...    29   7.7  

>BT021400-1|AAX33548.1| 1098|Drosophila melanogaster LD13667p
           protein.
          Length = 1098

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = -1

Query: 595 DFIQGSR*FWDEINENIGALQTPQSPKSRPGYSHAHTCRNALKIFYD*YNCLPNVSANHS 416
           DFI  S    DE  +++  +Q P +   RP +  ++T    LK+F+D Y  LPN  A++S
Sbjct: 226 DFIGSST---DESADDMNNVQIPTA--WRPAFLDSNT----LKLFFDLYQILPNGLASYS 276

Query: 415 FVVL 404
              L
Sbjct: 277 ISCL 280


>AF222744-1|AAG44254.1| 1098|Drosophila melanogaster RanBP16
           protein.
          Length = 1098

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = -1

Query: 595 DFIQGSR*FWDEINENIGALQTPQSPKSRPGYSHAHTCRNALKIFYD*YNCLPNVSANHS 416
           DFI  S    DE  +++  +Q P +   RP +  ++T    LK+F+D Y  LPN  A++S
Sbjct: 226 DFIGSST---DESADDMNNVQIPTA--WRPAFLDSNT----LKLFFDLYQILPNGLASYS 276

Query: 415 FVVL 404
              L
Sbjct: 277 ISCL 280


>AE014298-2289|AAF48541.3| 1098|Drosophila melanogaster CG33180-PB
           protein.
          Length = 1098

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = -1

Query: 595 DFIQGSR*FWDEINENIGALQTPQSPKSRPGYSHAHTCRNALKIFYD*YNCLPNVSANHS 416
           DFI  S    DE  +++  +Q P +   RP +  ++T    LK+F+D Y  LPN  A++S
Sbjct: 226 DFIGSST---DESADDMNNVQIPTA--WRPAFLDSNT----LKLFFDLYQILPNGLASYS 276

Query: 415 FVVL 404
              L
Sbjct: 277 ISCL 280


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,583,804
Number of Sequences: 53049
Number of extensions: 683030
Number of successful extensions: 1356
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)