Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0130
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    25   2.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   4.6  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   8.1  

>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 523 TLYHKIYDLLMRKYSHWRTH 464
           TL   +Y L++RKYS WR++
Sbjct: 17  TLCLCVYLLVVRKYSFWRSY 36


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 489 GSIVTGGHTGTATSYITSVAHRPD 418
           G  +  G   T+T+ +T+ AH PD
Sbjct: 586 GGAIPEGQEPTSTTSLTTSAHHPD 609


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 3   APDELYHMRGLDVGC*ATGGLVSLTLT 83
           +PD + HM+G   GC    GL S T T
Sbjct: 411 SPDSIRHMQGRPGGC---NGLHSTTAT 434


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,235
Number of Sequences: 2352
Number of extensions: 13393
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)