Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0127
(669 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 66 6e-12
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 66 6e-12
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 66 6e-12
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 66 6e-12
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 66 6e-12
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 66 6e-12
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 66 6e-12
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 66 6e-12
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 64 2e-11
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 64 2e-11
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 64 2e-11
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 28 1.4
SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces pomb... 27 2.4
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 25 7.5
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 25 9.9
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 25 9.9
SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase Pp... 25 9.9
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 65.7 bits (153), Expect = 6e-12
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ SA+ I +R D++K F G +++ +P+G+ T+PA FQ ++ IL + K
Sbjct: 501 LDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAK-ES 559
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQSK 280
V ++DDILI SK+ S+H+ H+ + L++ K
Sbjct: 560 HVVCYMDDILIHSKSESEHVKHVKDVLQKLK 590
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + +K + KC F VK++G+ I + P +N+ + + P+ +K +RQ
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +N+ FIP +++ PL KK + +A E +K L S P+
Sbjct: 645 FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPV 698
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 65.7 bits (153), Expect = 6e-12
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ SA+ I +R D++K F G +++ +P+G+ T+PA FQ ++ IL + K
Sbjct: 501 LDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAK-ES 559
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQSK 280
V ++DDILI SK+ S+H+ H+ + L++ K
Sbjct: 560 HVVCYMDDILIHSKSESEHVKHVKDVLQKLK 590
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + +K + KC F VK++G+ I + P +N+ + + P+ +K +RQ
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +N+ FIP +++ PL KK + +A E +K L S P+
Sbjct: 645 FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPV 698
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 65.7 bits (153), Expect = 6e-12
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ SA+ I +R D++K F G +++ +P+G+ T+PA FQ ++ IL + K
Sbjct: 501 LDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAK-ES 559
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQSK 280
V ++DDILI SK+ S+H+ H+ + L++ K
Sbjct: 560 HVVCYMDDILIHSKSESEHVKHVKDVLQKLK 590
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + +K + KC F VK++G+ I + P +N+ + + P+ +K +RQ
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +N+ FIP +++ PL KK + +A E +K L S P+
Sbjct: 645 FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPV 698
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 65.7 bits (153), Expect = 6e-12
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ SA+ I +R D++K F G +++ +P+G+ T+PA FQ ++ IL + K
Sbjct: 501 LDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAK-ES 559
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQSK 280
V ++DDILI SK+ S+H+ H+ + L++ K
Sbjct: 560 HVVCYMDDILIHSKSESEHVKHVKDVLQKLK 590
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + +K + KC F VK++G+ I + P +N+ + + P+ +K +RQ
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +N+ FIP +++ PL KK + +A E +K L S P+
Sbjct: 645 FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPV 698
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 65.7 bits (153), Expect = 6e-12
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ SA+ I +R D++K F G +++ +P+G+ T+PA FQ ++ IL + K
Sbjct: 501 LDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAK-ES 559
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQSK 280
V ++DDILI SK+ S+H+ H+ + L++ K
Sbjct: 560 HVVCYMDDILIHSKSESEHVKHVKDVLQKLK 590
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + +K + KC F VK++G+ I + P +N+ + + P+ +K +RQ
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +N+ FIP +++ PL KK + +A E +K L S P+
Sbjct: 645 FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPV 698
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 65.7 bits (153), Expect = 6e-12
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ SA+ I +R D++K F G +++ +P+G+ T+PA FQ ++ IL + K
Sbjct: 501 LDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAK-ES 559
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQSK 280
V ++DDILI SK+ S+H+ H+ + L++ K
Sbjct: 560 HVVCYMDDILIHSKSESEHVKHVKDVLQKLK 590
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + +K + KC F VK++G+ I + P +N+ + + P+ +K +RQ
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +N+ FIP +++ PL KK + +A E +K L S P+
Sbjct: 645 FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPV 698
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 65.7 bits (153), Expect = 6e-12
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ SA+ I +R D++K F G +++ +P+G+ T+PA FQ ++ IL + K
Sbjct: 501 LDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAK-ES 559
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQSK 280
V ++DDILI SK+ S+H+ H+ + L++ K
Sbjct: 560 HVVCYMDDILIHSKSESEHVKHVKDVLQKLK 590
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + +K + KC F VK++G+ I + P +N+ + + P+ +K +RQ
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +N+ FIP +++ PL KK + +A E +K L S P+
Sbjct: 645 FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPV 698
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 65.7 bits (153), Expect = 6e-12
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ SA+ I +R D++K F G +++ +P+G+ T+PA FQ ++ IL + K
Sbjct: 501 LDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAK-ES 559
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQSK 280
V ++DDILI SK+ S+H+ H+ + L++ K
Sbjct: 560 HVVCYMDDILIHSKSESEHVKHVKDVLQKLK 590
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + +K + KC F VK++G+ I + P +N+ + + P+ +K +RQ
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +N+ FIP +++ PL KK + +A E +K L S P+
Sbjct: 645 FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPV 698
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + +K + KC F VK++G+ I + P +N+ + + P+ +K +RQ
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +N+ FIP +++ PL KK + +A E +K L S P+
Sbjct: 645 FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPV 698
Score = 61.7 bits (143), Expect = 9e-11
Identities = 31/91 (34%), Positives = 56/91 (61%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ SA+ I +R D++K F G +++ +P+G+ +PA FQ ++ IL + K
Sbjct: 501 LDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVK-ES 559
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQSK 280
V ++D+ILI SK+ S+H+ H+ + L++ K
Sbjct: 560 HVVCYMDNILIHSKSESEHVKHVKDVLQKLK 590
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + +K + KC F VK++G+ I + P +N+ + + P+ +K +RQ
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +N+ FIP +++ PL KK + +A E +K L S P+
Sbjct: 645 FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPV 698
Score = 61.7 bits (143), Expect = 9e-11
Identities = 31/91 (34%), Positives = 56/91 (61%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ SA+ I +R D++K F G +++ +P+G+ +PA FQ ++ IL + K
Sbjct: 501 LDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVK-ES 559
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQSK 280
V ++D+ILI SK+ S+H+ H+ + L++ K
Sbjct: 560 HVVCYMDNILIHSKSESEHVKHVKDVLQKLK 590
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 64.1 bits (149), Expect = 2e-11
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + +K + KC F VK++G+ I + P +N+ + + P+ +K +RQ
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQ 644
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +N+ FIP +++ PL KK + +A E +K L S P+
Sbjct: 645 FLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPV 698
Score = 61.7 bits (143), Expect = 9e-11
Identities = 31/91 (34%), Positives = 56/91 (61%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ SA+ I +R D++K F G +++ +P+G+ +PA FQ ++ IL + K
Sbjct: 501 LDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVK-ES 559
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQSK 280
V ++D+ILI SK+ S+H+ H+ + L++ K
Sbjct: 560 HVVCYMDNILIHSKSESEHVKHVKDVLQKLK 590
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 412 VPRTQKNIRQFLGKINFYHGFIPNRAKIL 498
+PR + IR+FL K+N+ G NR +L
Sbjct: 617 IPRVIEMIREFLTKLNYETGKTENRLSLL 645
>SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 405
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 185 DFTVNFIDDILIFSKTFSDHIN-HLHNFLKQSKQKVSG*NLLNAHLL 322
D+T +F+D +L F ++ H+N HL + L ++ G L A L
Sbjct: 159 DWTFDFLDYVLFFDCIYNPHLNAHLVSCLASLAERYPGMQCLFAQEL 205
>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 23 AFWSIPLRIEDKNKTGFVTQDG 88
A W++ L IE++ K FVT G
Sbjct: 887 ALWNLRLAIEEEGKRRFVTNGG 908
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/52 (19%), Positives = 25/52 (48%)
Frame = +2
Query: 101 TCLPFGLKTSPAIFQRILHNILRKYKLTDFTVNFIDDILIFSKTFSDHINHL 256
T + G+ F+R + Y++T +++F+DD+ + + + H+
Sbjct: 400 TPMALGMNRGVLSFERSIEKRKNDYEVTGQSLSFVDDVSLTPDSAPKYAGHV 451
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 570 DCKNLAMLPTNSLKFLDSIFTNKYIYRRL 656
D +L LPT +L+ L+S+ N+Y Y R+
Sbjct: 451 DSLDLQSLPTPTLEQLESVPFNRYGYVRI 479
>SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase
Ppk34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 382 DNLISIKDFPVPRTQKNIRQFLGKINFYHG 471
D+ IS P+ +K+ RQ + +N+ HG
Sbjct: 164 DHGISFDPMPLETCRKSFRQLVLAVNYIHG 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,879,230
Number of Sequences: 5004
Number of extensions: 61919
Number of successful extensions: 183
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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