Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0127
(669 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 91 9e-19
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 89 5e-18
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 80 3e-15
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 78 9e-15
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 78 9e-15
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 78 1e-14
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 77 3e-14
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 77 3e-14
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 76 4e-14
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 76 4e-14
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 76 4e-14
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 76 4e-14
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 76 4e-14
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 76 4e-14
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 76 4e-14
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 76 4e-14
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 76 4e-14
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 75 7e-14
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 75 1e-13
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 74 2e-13
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 73 3e-13
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 71 1e-12
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 67 2e-11
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 63 3e-10
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 62 7e-10
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 62 7e-10
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 56 3e-08
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 56 4e-08
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 56 4e-08
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 55 1e-07
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 55 1e-07
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 52 7e-07
EF428975-1|ABO20847.1| 2381|Drosophila melanogaster Kon-tiki pro... 31 1.9
AE014134-2938|AAF53672.2| 2355|Drosophila melanogaster CG10275-P... 31 1.9
BT015977-1|AAV36862.1| 527|Drosophila melanogaster RE70280p pro... 28 10.0
AE014297-1246|AAF54594.1| 527|Drosophila melanogaster CG6653-PA... 28 10.0
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 91.5 bits (217), Expect = 9e-19
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Frame = +1
Query: 259 QLFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIR 438
++FE ++ +L+ KC F ++LGHI+ N IKP + +I +FP+P+T K I+
Sbjct: 457 KVFEKLRDANLKLQLDKCEFMKKETEFLGHIVTTNGIKPNPNKTKAITNFPLPKTPKQIK 516
Query: 439 QFLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQ---EAFETVKTLLCSQPI 603
FLG FY FIPN AKI+ P+ + K K + KC+ E+FE +K L+ S PI
Sbjct: 517 SFLGLCGFYRKFIPNFAKIVKPMTL--KLKKGAIIDTKCKEYIESFEKLKVLITSDPI 572
Score = 70.1 bits (164), Expect = 3e-12
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+T+D+ F I + KT F T+ GHY++T +PFGLK +PA FQR ++N+L
Sbjct: 372 TTIDLAKGFHQIQMDENSIAKTAFSTKHGHYEYTRMPFGLKNAPATFQRCMNNLLEDLIY 431
Query: 182 TDFTVNFIDDILIFSKTFSDHI 247
D V ++DDI+++S +HI
Sbjct: 432 KDCLV-YLDDIIVYSTPLEEHI 452
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 89.0 bits (211), Expect = 5e-18
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
STLD+ F+ I + +D +KT F T GHY++ +PFGL+ +P+ FQR+++NIL Y
Sbjct: 224 STLDLAKGFYQIEMDNKDVHKTAFSTTSGHYEFLRMPFGLRNAPSTFQRLMNNILSPY-T 282
Query: 182 TDFTVNFIDDILIFSKTFSDHINHL 256
F + ++DDILIFSK +H+NHL
Sbjct: 283 GQFCIVYMDDILIFSKNIGEHVNHL 307
Score = 72.1 bits (169), Expect = 6e-13
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+F + +L+ KC FA + +++LGH I +KP + +I +P QK I+
Sbjct: 310 IFSCLSKANLKLQSDKCEFAREEIEFLGHTINSEGLKPSQKKIDAICKINLPTNQKQIKS 369
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQ-EAFETVKTLLCSQPI 603
FLG + +I + +KI PL+ Y KK D+ EAF+ +K L+ S PI
Sbjct: 370 FLGITGYLRRYIKDYSKIAQPLIKYLKKNSKINTHDQXYVEAFQKLKILITSDPI 424
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 79.8 bits (188), Expect = 3e-15
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Frame = +1
Query: 259 QLFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIR 438
++F ++ +L+ KC F ++LGHII + IKP + ++ +FP+P++ K I+
Sbjct: 372 KVFLKLREANLKLQLDKCEFLKKETEFLGHIITTDGIKPNPAKIKAVVNFPIPKSTKEIK 431
Query: 439 QFLGKINFYHGFIPNRAKILDPLLIY*KK-TKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG FY FIPN AKI P+ + KK + + AFE +K L+ S PI
Sbjct: 432 SFLGLCGFYRKFIPNFAKIAKPMTLRLKKGSIINIKDSDYYLAFEKLKVLITSDPI 487
Score = 69.7 bits (163), Expect = 3e-12
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+T+D+ F I + KT F T++GH+++T +PFGLK +PA FQR ++N+L
Sbjct: 287 TTIDLAKGFHQIQMDENSIAKTAFSTKNGHFEYTRMPFGLKNAPATFQRCMNNLLADLIY 346
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHN-FLK 271
+ V ++DDI+++S + +HI L FLK
Sbjct: 347 KNCLV-YLDDIIVYSTSLEEHIMSLRKVFLK 376
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 78.2 bits (184), Expect = 9e-15
Identities = 37/115 (32%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+F +++ F+++ TK F ++LGHI+ + ++P + + +IK+FP P ++K+I+
Sbjct: 380 IFGRLRSANFKVQLTKSYFLRRETEFLGHIVSQEGVRPNPNKIEAIKNFPCPHSKKSIKS 439
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*K-KTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG + +Y FI + A++ P+ + KS D+ ++AFE KTLL + PI
Sbjct: 440 FLGLLGYYRKFIRDFARLTQPMTQKLRGNNKSIIIDDEFKKAFEYCKTLLSNDPI 494
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
STLD+ S F I + +D KT F + GHY++ +PFGLK +PA FQR++ NI +
Sbjct: 294 STLDLASGFHQIEMNPDDTPKTAFTVEGGHYEFIRMPFGLKNAPATFQRVMDNIFGDL-I 352
Query: 182 TDFTVNFIDDILIFSKTFSDHINHL 256
+ ++DDI+IFS + +H HL
Sbjct: 353 GTICLVYLDDIIIFSTSLQEHFIHL 377
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 78.2 bits (184), Expect = 9e-15
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+FE + +L+ KC F +LGH+I K+ IKP + + +I+D+P+P K I+
Sbjct: 347 VFEKLSQANLKLQLDKCEFLRQETTFLGHVITKDGIKPNPEKIKAIQDYPLPSKPKEIKA 406
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KK-TKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +Y FIPN + I PL KK K + EAF+ +K L+ PI
Sbjct: 407 FLGITGYYRKFIPNFSDIAKPLTKCLKKGVKIDTKHKEYIEAFQKLKLLISEDPI 461
Score = 74.9 bits (176), Expect = 9e-14
Identities = 35/94 (37%), Positives = 57/94 (60%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+T+D+ F I + E KT F T+ GHY++T +PFGLK +PA FQR ++N+LR L
Sbjct: 261 TTIDLAKGFHQIEMDSESIAKTAFSTKYGHYEYTRMPFGLKNAPATFQRCMNNLLRPL-L 319
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLKQSKQ 283
+ ++DDI++FS + +H+ L ++ Q
Sbjct: 320 NKNCLVYLDDIIVFSTSLEEHLQSLEAVFEKLSQ 353
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 77.8 bits (183), Expect = 1e-14
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+F+A+ +L+ KC F +LGH++ I+P + L +I+++P+P K I+
Sbjct: 332 VFQALSNANLKLQLDKCEFLKHDTYFLGHMVSPEGIRPNPEKLRAIENYPLPTKPKEIKS 391
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKS-SFGSDKCQEAFETVKTLLCSQPI 603
FLG FY FIP+ A+I PL KK K + + EAF+ +K L+ + PI
Sbjct: 392 FLGLTGFYRKFIPHFAQIAKPLTTCLKKDKKVDIKNPEYIEAFKRLKLLISNDPI 446
Score = 74.5 bits (175), Expect = 1e-13
Identities = 33/85 (38%), Positives = 54/85 (63%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+T+D+ F I + E KT F T+ GHY++T +PFGLK +PA FQR ++++LR L
Sbjct: 246 TTIDLIKGFHQIEMDPESIPKTAFTTKTGHYEYTRMPFGLKNAPATFQRCMNDVLRPL-L 304
Query: 182 TDFTVNFIDDILIFSKTFSDHINHL 256
+ ++DDI++FS + +H+ L
Sbjct: 305 NKICMVYLDDIIVFSASLEEHLQSL 329
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 76.6 bits (180), Expect = 3e-14
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+T+D+ F I + E +KT F T+ GHY++ +PFGL+ +PA FQR ++NILR L
Sbjct: 298 TTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPL-L 356
Query: 182 TDFTVNFIDDILIFSKTFSDHINHL 256
+ ++DDI+IFS + ++H+N +
Sbjct: 357 NKHCLVYLDDIIIFSTSLTEHLNSI 381
Score = 76.2 bits (179), Expect = 4e-14
Identities = 47/130 (36%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Frame = +1
Query: 220 IFKNLF*SH*PSTQL-FEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLIS 396
IF H S QL F + +L+ KC F +LGHI+ + IKP + +
Sbjct: 369 IFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKA 428
Query: 397 IKDFPVPRTQKNIRQFLGKINFYHGFIPNRAKILDPLLIY*KK-TKSSFGSDKCQEAFET 573
I +P+P K IR FLG +Y FIPN A I P+ KK TK + EAFE
Sbjct: 429 IVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEK 488
Query: 574 VKTLLCSQPI 603
+K L+ PI
Sbjct: 489 LKALIIRDPI 498
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 76.6 bits (180), Expect = 3e-14
Identities = 41/107 (38%), Positives = 63/107 (58%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+TLD+ S F I ++ D KT F T +G Y++ LPFGLK +PAIFQR++ +ILR++ +
Sbjct: 215 TTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREH-I 273
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLKQSKQKVSG*NLLNAHLL 322
+IDDI++FS+ + H +L L + NL +H L
Sbjct: 274 GKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFL 320
Score = 50.0 bits (114), Expect = 3e-06
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Frame = +1
Query: 220 IFKNLF*SH*PSTQLFEA-IKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLIS 396
+F + +H + +L A + ++ K F V++LG+I+ + IK + +
Sbjct: 286 VFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRA 345
Query: 397 IKDFPVPRTQKNIRQFLGKINFYHGFIPNRAKILDPLL-----IY*KKTKSSFGS----- 546
I + P P + K +++FLG ++Y FI + AK+ PL +Y KSS S
Sbjct: 346 ISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLY-ANIKSSQSSKVPIT 404
Query: 547 --DKCQEAFETVKTLLCSQPI 603
+ ++F +K++LCS I
Sbjct: 405 LDETALQSFNDLKSILCSSEI 425
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/90 (38%), Positives = 56/90 (62%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+TLD+ S + I L D+ KT F G Y++ LPFGL+ + +IFQR L ++LR+ ++
Sbjct: 254 TTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLRE-QI 312
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLK 271
++DD++IFS+ SDH+ H+ LK
Sbjct: 313 GKICYVYVDDVIIFSENESDHVRHIDTVLK 342
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +1
Query: 292 RLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKINFYHG 471
R+ K F +SV+YLG I+ K+ K + + +I+++P P +R FLG ++Y
Sbjct: 350 RVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRV 409
Query: 472 FIPNRAKILDPL 507
FI + A I P+
Sbjct: 410 FIKDFAAIARPI 421
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/90 (38%), Positives = 56/90 (62%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+TLD+ S + I L D+ KT F G Y++ LPFGL+ + +IFQR L ++LR+ ++
Sbjct: 249 TTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLRE-QI 307
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLK 271
++DD++IFS+ SDH+ H+ LK
Sbjct: 308 GKICYVYVDDVIIFSENESDHVRHIDTVLK 337
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +1
Query: 292 RLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKINFYHG 471
R+ K F +SV+YLG I+ K+ K + + +I+++P P +R FLG ++Y
Sbjct: 345 RVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRV 404
Query: 472 FIPNRAKILDPL 507
FI + A I P+
Sbjct: 405 FIKDFAAIARPI 416
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/90 (38%), Positives = 56/90 (62%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+TLD+ S + I L D+ KT F G Y++ LPFGL+ + +IFQR L ++LR+ ++
Sbjct: 284 TTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLRE-QI 342
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLK 271
++DD++IFS+ SDH+ H+ LK
Sbjct: 343 GKICYVYVDDVIIFSENESDHVRHIDTVLK 372
Score = 45.2 bits (102), Expect = 8e-05
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 292 RLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKINFYHG 471
R+ K F ++SV+YLG I+ K+ + + +I+++P P +R FLG ++Y
Sbjct: 380 RVSQEKTRFFTESVEYLGFIVSKDGTISDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRV 439
Query: 472 FIPNRAKILDPL 507
FI + A I P+
Sbjct: 440 FIKDFAAIARPI 451
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/90 (38%), Positives = 56/90 (62%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+TLD+ S + I L D+ KT F G Y++ LPFGL+ + +IFQR L ++LR+ ++
Sbjct: 284 TTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLRE-QI 342
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLK 271
++DD++IFS+ SDH+ H+ LK
Sbjct: 343 GKICYVYVDDVIIFSENESDHVRHIDTVLK 372
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +1
Query: 292 RLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKINFYHG 471
R+ K F +SV+YLG I+ K+ K + + +I+++P P +R FLG ++Y
Sbjct: 380 RVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRV 439
Query: 472 FIPNRAKILDPL 507
FI + A I P+
Sbjct: 440 FIKDFAAIARPI 451
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/90 (38%), Positives = 56/90 (62%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+TLD+ S + I L D+ KT F G Y++ LPFGL+ + +IFQR L ++LR+ ++
Sbjct: 249 TTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLRE-QI 307
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLK 271
++DD++IFS+ SDH+ H+ LK
Sbjct: 308 GKICYVYVDDVIIFSENESDHVRHIDTVLK 337
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +1
Query: 292 RLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKINFYHG 471
R+ K F +SV+YLG I+ K+ K + + +I+++P P +R FLG ++Y
Sbjct: 345 RVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRV 404
Query: 472 FIPNRAKILDPL 507
FI + A I P+
Sbjct: 405 FIKDFAAIARPI 416
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/90 (38%), Positives = 56/90 (62%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+TLD+ S + I L D+ KT F G Y++ LPFGL+ + +IFQR L ++LR+ ++
Sbjct: 249 TTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLRE-QI 307
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLK 271
++DD++IFS+ SDH+ H+ LK
Sbjct: 308 GKICYVYVDDVIIFSENESDHVRHIDTVLK 337
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +1
Query: 292 RLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKINFYHG 471
R+ K F +SV+YLG I+ K+ K + + +I+++P P +R FLG ++Y
Sbjct: 345 RVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRV 404
Query: 472 FIPNRAKILDPL 507
FI + A I P+
Sbjct: 405 FIKDFAAIARPI 416
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 76.2 bits (179), Expect = 4e-14
Identities = 37/114 (32%), Positives = 64/114 (56%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+FE ++ F+L+ +K F +++LGHI+ ++ +KP + + +IK FP P ++ I+
Sbjct: 494 VFEKLRAANFKLQPSKSEFLRKEIEFLGHIVTQDGVKPNPNKISAIKKFPCPTNRRAIKS 553
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FLG + +Y FI + A+I P+ K + +AFE KTLL + PI
Sbjct: 554 FLGLLGYYRKFIRDFARITKPMTKQLKGKRQVTTDKDFVDAFEQCKTLLSNDPI 607
Score = 74.1 bits (174), Expect = 2e-13
Identities = 34/82 (41%), Positives = 52/82 (63%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
STLD+ S F I + +D KT F + GHY++T +PFGLK +PA FQR++ ++L
Sbjct: 408 STLDLTSGFHQIEMNPKDIAKTAFTVEGGHYEFTRMPFGLKNAPATFQRVMDSVLGDLNG 467
Query: 182 TDFTVNFIDDILIFSKTFSDHI 247
T + ++DDI+IFS + H+
Sbjct: 468 T-ICLFYLDDIIIFSPSLQKHL 488
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/90 (38%), Positives = 57/90 (63%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+TLD+ S + I L D+ KT F G Y++ LPFGL+ + +IFQR + +ILR+ ++
Sbjct: 251 TTLDLKSGYHQITLAERDREKTAFAVNGGKYEFRRLPFGLRNAASIFQRTIDDILRE-QI 309
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLK 271
F ++DD++IFS+ +DH+ H+ LK
Sbjct: 310 GKFCYVYVDDVIIFSEDENDHVKHVDWVLK 339
Score = 48.8 bits (111), Expect = 7e-06
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ +++ R+ K F SV +LG I+ N + + +IK+FP P+ +R
Sbjct: 337 VLKSLYDANMRISAEKSRFFKKSVSFLGFIVTNNGAATDPEKVKAIKEFPEPKNVFEVRS 396
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFG-----------SDKCQEAFETVKTLL 588
FLG ++Y FI + A I P+ K S S+ Q AFE ++ +L
Sbjct: 397 FLGLASYYRCFIKDFASIARPISDILKGENGSVSRHRSRSIQVEFSEAQQRAFEKLRNIL 456
Query: 589 CSQPI 603
S+ +
Sbjct: 457 ASEDV 461
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/90 (38%), Positives = 56/90 (62%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+TLD+ S + I L D+ KT F G Y++ LPFGL+ + +IFQR L ++LR+ ++
Sbjct: 702 TTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLRE-QI 760
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLK 271
++DD++IFS+ SDH+ H+ LK
Sbjct: 761 GKICYVYVDDVIIFSENESDHVRHIDTVLK 790
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +1
Query: 292 RLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKINFYHG 471
R+ K F +SV+YLG I+ K+ K + + +I+++P P +R FLG ++Y
Sbjct: 798 RVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRV 857
Query: 472 FIPNRAKILDPL 507
FI + A I P+
Sbjct: 858 FIKDFAAIARPI 869
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 75.4 bits (177), Expect = 7e-14
Identities = 32/82 (39%), Positives = 54/82 (65%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+T+D+ S F I + D +KT F ++GHY++T +PFGLK +PA FQR++ N+L +
Sbjct: 276 TTIDLASGFHQIQMNPRDASKTAFTVENGHYEFTRMPFGLKNAPATFQRVMDNVLGDL-V 334
Query: 182 TDFTVNFIDDILIFSKTFSDHI 247
+ + ++DDI++FS + HI
Sbjct: 335 GNVCLVYLDDIIVFSPSLQKHI 356
Score = 31.9 bits (69), Expect = 0.81
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKP 375
+F ++ +++ +KC+F + +LGHI+ + +KP
Sbjct: 362 VFTKLQNANLKIQPSKCSFLRKEIDFLGHIVTQEGVKP 399
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 74.5 bits (175), Expect = 1e-13
Identities = 39/94 (41%), Positives = 55/94 (58%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
S LD+ S F I L+ D KT F +G Y++T LPFGLK +P+IFQR L +IL ++ +
Sbjct: 287 SVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALDDILHEH-I 345
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLKQSKQ 283
+IDDI+IFSK H +L + +Q
Sbjct: 346 GKICFIYIDDIIIFSKDDETHYQNLDTIFRTLQQ 379
Score = 67.3 bits (157), Expect = 2e-11
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+F ++ + + KC F V++LG ++ I+ + +I DFP+PRT K +R
Sbjct: 373 IFRTLQQANMKCQLDKCEFMKRKVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRS 432
Query: 442 FLGKINFYHGFIPNRAKILDPL 507
FLG +Y FIPN AK+ PL
Sbjct: 433 FLGLSGYYRRFIPNYAKLAKPL 454
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+TLD+ SAF I L +D+ KT F +G Y++ LPFGLK +P+IFQR + +++R ++
Sbjct: 280 TTLDLKSAFHQILLAEKDRAKTAFSVGNGKYEFCRLPFGLKNAPSIFQRAIDDVVRD-RI 338
Query: 182 TDFTVNFIDDILIFSKTFSDHIN 250
++DD++IFS DH+N
Sbjct: 339 GKSCYVYVDDVIIFSNGIEDHVN 361
Score = 41.5 bits (93), Expect = 0.001
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+ + + R+ K F +SV+YLG ++ I + +I+ + P ++R
Sbjct: 366 VLDRLSGANMRVSKEKSFFFKESVEYLGFMVSSGGITTSPSKVEAIQKYNQPTNLFSVRS 425
Query: 442 FLGKINFYHGFIPNRAKILDPL------------LIY*KKTKSSFGSDKCQEAFETVKTL 585
FLG ++Y FI + A I PL KK SF +C AFE +K +
Sbjct: 426 FLGLASYYRCFIKDFASIARPLTDILKGENGKVSASQSKKIPISFDERQC-SAFEKLKNV 484
Query: 586 LCSQPI 603
L S+ +
Sbjct: 485 LVSENV 490
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 73.3 bits (172), Expect = 3e-13
Identities = 33/85 (38%), Positives = 54/85 (63%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+T+D+ F I + E +KT F T+ GHY++ +PFGLK +PA FQR +++ILR L
Sbjct: 299 TTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPL-L 357
Query: 182 TDFTVNFIDDILIFSKTFSDHINHL 256
+ ++DDI++FS + +H+ L
Sbjct: 358 NKHCLVYLDDIIVFSTSLDEHLQSL 382
Score = 72.9 bits (171), Expect = 4e-13
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+FE + +L+ KC F +LGH++ + IKP + + +I+ +P+P K I+
Sbjct: 385 VFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKA 444
Query: 442 FLGKINFYHGFIPNRAKILDPLLIY*KKT-KSSFGSDKCQEAFETVKTLLCSQPI 603
FLG +Y FIPN A I P+ KK K + + AF+ +K L+ PI
Sbjct: 445 FLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPI 499
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = +1
Query: 259 QLFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIR 438
++F+ + L+ KC F S+KYLG II K+ I P + + +IK+FP+P ++
Sbjct: 889 EIFKRLVENKLELRIDKCEFMQSSIKYLGFIINKDGIMPNDKGIEAIKNFPIPNNVHTVQ 948
Query: 439 QFLGKINFYHGFIPNRAKILDPLLIY*KKTKS-SFGSDKCQEAFETVKTLLCSQPI 603
FLG +++ FI + +++ PL KK K FGS++ F +K L P+
Sbjct: 949 SFLGLCSYFRRFIKDFSRLAKPLHDILKKDKPFKFGSEE-MICFNMLKDKLIQSPV 1003
Score = 67.3 bits (157), Expect = 2e-11
Identities = 29/89 (32%), Positives = 52/89 (58%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ + F+ + ++ E T FVT G Y+W +PFGLK +P++FQR ++ I +
Sbjct: 805 LDLKNGFFHVHVKKESIKYTSFVTPLGQYEWLRMPFGLKNAPSVFQRFVNKIFADMIREN 864
Query: 188 FTVNFIDDILIFSKTFSDHINHLHNFLKQ 274
V ++DDIL+ ++ ++H+ L K+
Sbjct: 865 KVVVYMDDILLATENINEHLETLKEIFKR 893
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 67.3 bits (157), Expect = 2e-11
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +1
Query: 262 LFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQ 441
+F ++ + + KC F V++LG ++ I+ + +I DFP+PRT K +R
Sbjct: 217 IFRTLQQANMKCQLDKCEFMKRKVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRS 276
Query: 442 FLGKINFYHGFIPNRAKILDPL 507
FLG +Y FIPN AK+ PL
Sbjct: 277 FLGLSGYYRRFIPNYAKLAKPL 298
Score = 62.1 bits (144), Expect = 7e-10
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
S LD+ S F I L+ D KT F +G Y++T LPFGLK +P+IFQR L Y
Sbjct: 130 SVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALDG----YSS 185
Query: 182 TDFTVNFIDDILIFSKTFS-DHINHLHN 262
+ V ++ IL S +FS D H N
Sbjct: 186 RTYRVRYVSFILTTSSSFSKDDETHYQN 213
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 63.3 bits (147), Expect = 3e-10
Identities = 34/122 (27%), Positives = 62/122 (50%)
Frame = +1
Query: 286 GFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKINFY 465
GF KC+F +V+YLG+ ++ I+P + S+ P P+T +RQF+G +++
Sbjct: 627 GFTFNLAKCSFLKTTVQYLGYEVRAGEIRPNVRKIASLSSLPPPQTVSGVRQFIGLASYF 686
Query: 466 HGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPIP*NFWIPYLPINIY 645
F+ ++++ PL + S + +E V T+L ++P F P PI ++
Sbjct: 687 RKFVSGFSQLMKPLYSLSSGSGKITWSAELEEIRLKVVTILTNEPALVIF-DPQYPIELH 745
Query: 646 TD 651
TD
Sbjct: 746 TD 747
Score = 39.1 bits (87), Expect = 0.005
Identities = 26/75 (34%), Positives = 37/75 (49%)
Frame = +2
Query: 8 LDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKLTD 187
LD+ S F IP+ E T FV P GLK +P++FQR + N L
Sbjct: 546 LDMASGFHQIPIHPESVEYTAFV-----------PDGLKNAPSVFQRTVINALGDL-ANS 593
Query: 188 FTVNFIDDILIFSKT 232
F + ++DDI++ S T
Sbjct: 594 FVIVYMDDIMVVSPT 608
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 62.1 bits (144), Expect = 7e-10
Identities = 32/106 (30%), Positives = 53/106 (50%)
Frame = +1
Query: 286 GFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKINFY 465
G ++K+ KC F + +LGHII+ I P + ++ F P+ K ++ FLG F+
Sbjct: 670 GLKIKWKKCNFMQRRIHFLGHIIEGGQICPGKEKTSAVNSFGTPQNVKAVQGFLGLTGFF 729
Query: 466 HGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FIP A+I PL KK Q++ +K +L ++P+
Sbjct: 730 RKFIPGYAQIARPLTDLLKKDAIFNIGPVEQQSVNKLKEILVNEPV 775
Score = 54.8 bits (126), Expect = 1e-07
Identities = 25/94 (26%), Positives = 53/94 (56%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+T+D+ + F+ + + K T FVT++G +++ PFG K SPA F R + I ++
Sbjct: 575 TTMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFVQFIFQELIN 634
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLKQSKQ 283
++ ++DDI++++ T + + LK++ +
Sbjct: 635 SNIMQLYMDDIIVYAATPEECMEKTEMVLKRAAE 668
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 62.1 bits (144), Expect = 7e-10
Identities = 32/106 (30%), Positives = 53/106 (50%)
Frame = +1
Query: 286 GFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKINFY 465
G ++K+ KC F + +LGHII+ I P + ++ F P+ K ++ FLG F+
Sbjct: 364 GLKIKWKKCNFMQRRIHFLGHIIEGGQICPGKEKTSAVNSFGTPQNVKAVQGFLGLTGFF 423
Query: 466 HGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLLCSQPI 603
FIP A+I PL KK Q++ +K +L ++P+
Sbjct: 424 RKFIPGYAQIARPLTDLLKKDAIFNIGPVEQQSVNKLKEILVNEPV 469
Score = 54.8 bits (126), Expect = 1e-07
Identities = 25/94 (26%), Positives = 53/94 (56%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRILHNILRKYKL 181
+T+D+ + F+ + + K T FVT++G +++ PFG K SPA F R + I ++
Sbjct: 269 TTMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFVQFIFQELIN 328
Query: 182 TDFTVNFIDDILIFSKTFSDHINHLHNFLKQSKQ 283
++ ++DDI++++ T + + LK++ +
Sbjct: 329 SNIMQLYMDDIIVYAATPEECMEKTEMVLKRAAE 362
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 56.4 bits (130), Expect = 3e-08
Identities = 33/108 (30%), Positives = 49/108 (45%)
Frame = +1
Query: 256 TQLFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNI 435
T +F + +L KC+F V +LGH + P + IK++PVP +
Sbjct: 80 TDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDDKKYDVIKNYPVPHDADSA 139
Query: 436 RQFLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVK 579
R+F+ N+Y FI N A + KK S +CQ AFE +K
Sbjct: 140 RRFVAFCNYYRRFIRNFADYSRHITRLCKKNVPFEWSSECQNAFEYLK 187
Score = 45.2 bits (102), Expect = 8e-05
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2
Query: 20 SAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRIL 154
S F I L +N T F T +G Y++T LPFGLK +P FQR++
Sbjct: 2 SGFHQIELEENSRNITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 46
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 56.0 bits (129), Expect = 4e-08
Identities = 34/111 (30%), Positives = 51/111 (45%)
Frame = +1
Query: 256 TQLFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNI 435
T +FE + +L KC+F V YLGH I P + I+ +P+P +
Sbjct: 246 TNVFELCRRHNLKLHPGKCSFFMKEVTYLGHKCTDKGILPDDTKYEVIEKYPIPTDADSA 305
Query: 436 RQFLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLL 588
R+F+ N+Y FI N + L KK + +C +AFE +KT L
Sbjct: 306 RRFVAFCNYYRRFIKNFSDHSRHLTRLCKKNVQFEWTAECNDAFEYLKTEL 356
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQR 148
S LD+ S F I L ++ T F T +G Y++T LP+GLK +P FQR
Sbjct: 162 SCLDLMSGFHQIELEKRYRDITSFSTANGSYRFTRLPYGLKVAPNSFQR 210
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 56.0 bits (129), Expect = 4e-08
Identities = 34/111 (30%), Positives = 50/111 (45%)
Frame = +1
Query: 256 TQLFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNI 435
T +FE + +L KC+F V +LGH I P + +I+ +PVP +
Sbjct: 385 TNVFELCRKNNLKLHPDKCSFFMSEVTFLGHKCTDKGILPDDTKYDAIQRYPVPTDADSA 444
Query: 436 RQFLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLL 588
R+F+ N+Y FI N A + KK + CQ AFE +K L
Sbjct: 445 RRFVAFCNYYRRFIQNFADYSRHITRLCKKNVKFEWTADCQHAFEHLKKQL 495
Score = 49.6 bits (113), Expect = 4e-06
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRIL 154
S LD+ S F I L + +N T F T G Y++T LP+GLK +P FQR++
Sbjct: 301 SCLDLMSGFHQIELEEDSRNITSFSTSSGSYRFTRLPYGLKIAPNSFQRMM 351
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 54.8 bits (126), Expect = 1e-07
Identities = 33/111 (29%), Positives = 53/111 (47%)
Frame = +1
Query: 256 TQLFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNI 435
T++F + +L KC+F V +LGH I P + I+++PVP +
Sbjct: 491 TEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSA 550
Query: 436 RQFLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLL 588
R+F+ N+Y FI N A + KK +D+CQ+AF +K+ L
Sbjct: 551 RRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQL 601
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRIL 154
S LD+ S F I L ++ T F T +G Y++T LPFGLK +P FQR++
Sbjct: 407 SCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 457
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 54.8 bits (126), Expect = 1e-07
Identities = 33/111 (29%), Positives = 53/111 (47%)
Frame = +1
Query: 256 TQLFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNI 435
T++F + +L KC+F V +LGH I P + I+++PVP +
Sbjct: 254 TEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSA 313
Query: 436 RQFLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVKTLL 588
R+F+ N+Y FI N A + KK +D+CQ+AF +K+ L
Sbjct: 314 RRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQL 364
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +2
Query: 2 STLDINSAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRIL 154
S LD+ S F I L ++ T F T +G Y++T LPFGLK +P FQR++
Sbjct: 170 SCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 220
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 52.0 bits (119), Expect = 7e-07
Identities = 32/108 (29%), Positives = 48/108 (44%)
Frame = +1
Query: 256 TQLFEAIKTEGFRLKFTKCTFASDSVKYLGHIIQKNCIKPVNDNLISIKDFPVPRTQKNI 435
T +F + +L KC+F V +LGH + P + IK++PVP +
Sbjct: 80 TDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDDKKYDVIKNYPVPHDADSA 139
Query: 436 RQFLGKINFYHGFIPNRAKILDPLLIY*KKTKSSFGSDKCQEAFETVK 579
R+F+ N+Y FI N A + KK S + Q AFE +K
Sbjct: 140 RRFVAFCNYYRRFIRNFADYSRHITRLCKKNVPFEWSSEYQNAFEYLK 187
Score = 45.2 bits (102), Expect = 8e-05
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2
Query: 20 SAFWSIPLRIEDKNKTGFVTQDGHYQWTCLPFGLKTSPAIFQRIL 154
S F I L +N T F T +G Y++T LPFGLK +P FQR++
Sbjct: 2 SGFHQIELEENSRNITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM 46
>EF428975-1|ABO20847.1| 2381|Drosophila melanogaster Kon-tiki
protein.
Length = 2381
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 185 DFTVNFIDDILIFSKTFSDHINHLHNFLKQSKQKVS 292
DFT F+DD++ F SD + N +K++K + S
Sbjct: 154 DFTAEFLDDVIGFRGCISDVFYNNINIIKRAKDRTS 189
>AE014134-2938|AAF53672.2| 2355|Drosophila melanogaster CG10275-PA
protein.
Length = 2355
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 185 DFTVNFIDDILIFSKTFSDHINHLHNFLKQSKQKVS 292
DFT F+DD++ F SD + N +K++K + S
Sbjct: 128 DFTAEFLDDVIGFRGCISDVFYNNINIIKRAKDRTS 163
>BT015977-1|AAV36862.1| 527|Drosophila melanogaster RE70280p
protein.
Length = 527
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 340 LGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKI 456
LGH I P+ + + +I D PVP NI + +G +
Sbjct: 52 LGHEITSVSPFPLKEPVANIHDIPVPELFDNIEEIVGNL 90
>AE014297-1246|AAF54594.1| 527|Drosophila melanogaster CG6653-PA
protein.
Length = 527
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 340 LGHIIQKNCIKPVNDNLISIKDFPVPRTQKNIRQFLGKI 456
LGH I P+ + + +I D PVP NI + +G +
Sbjct: 52 LGHEITSVSPFPLKEPVANIHDIPVPELFDNIEEIVGNL 90
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,939,550
Number of Sequences: 53049
Number of extensions: 556421
Number of successful extensions: 1372
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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