Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0126
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 33 0.20
U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 32 0.34
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 32 0.34
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z68333-4|CAA92723.2| 271|Caenorhabditis elegans Hypothetical pr... 31 1.0
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 30 1.8
Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 30 1.8
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 30 1.8
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 30 1.8
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 30 1.8
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 29 2.4
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 29 2.4
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 29 3.2
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 3.2
U00036-3|AAT92065.1| 529|Caenorhabditis elegans Dumpy : shorter... 29 3.2
U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter... 29 3.2
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 29 3.2
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 29 3.2
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 3.2
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 3.2
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 29 3.2
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 3.2
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 4.2
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 29 4.2
AJ561217-1|CAD99197.1| 210|Caenorhabditis elegans NAS-28 protei... 29 4.2
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 28 5.6
Z37092-10|CAA85459.1| 280|Caenorhabditis elegans Hypothetical p... 28 5.6
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 28 5.6
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 28 5.6
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 28 5.6
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 28 5.6
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 28 7.4
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 28 7.4
U64856-1|AAB04985.2| 429|Caenorhabditis elegans Hypothetical pr... 28 7.4
U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical pr... 28 7.4
U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical pr... 28 7.4
U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical pr... 28 7.4
U10414-12|AAA19079.3| 497|Caenorhabditis elegans Nematode astac... 28 7.4
AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular... 28 7.4
AL117200-7|CAB55059.1| 221|Caenorhabditis elegans Hypothetical ... 28 7.4
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 28 7.4
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical pr... 27 9.8
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 27 9.8
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassi... 27 9.8
AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative pota... 27 9.8
>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical
protein R09H10.5 protein.
Length = 1603
Score = 35.1 bits (77), Expect = 0.049
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 256 GGHYRCQCPSGVTGKHCDVIPANMTTTEASTVQEF 152
GGH C CP GV+G C+++ +TT T Q +
Sbjct: 634 GGHGNCICPFGVSGSFCEIL--TCSTTSPDTFQSY 666
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 268 VGSTGGHYRCQCPSGVTGKHCDVIPANMTTTEASTVQEFT 149
+GS+G RC CP G+ HC+ A T+ +V +F+
Sbjct: 174 IGSSG---RCSCPPGLYSAHCE---ARTCVTKIDSVVDFS 207
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 33.1 bits (72), Expect = 0.20
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCD 203
Y C+CP+G TGKHC+
Sbjct: 3969 YLCKCPNGFTGKHCE 3983
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 289 KRWTMSIVGSTGGHYRCQCPSGVTGKHCDV 200
++W + I Y C CP G+ G C V
Sbjct: 3695 EQWQLCIPSVHNSTYECVCPLGMEGDKCSV 3724
Score = 27.9 bits (59), Expect = 7.4
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 250 HYRCQCPSGVTGKHCDV 200
H++C+CPS +G C++
Sbjct: 3930 HFKCECPSRYSGNVCEI 3946
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 33.1 bits (72), Expect = 0.20
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCD 203
Y C+CP+G TGKHC+
Sbjct: 3969 YLCKCPNGFTGKHCE 3983
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 289 KRWTMSIVGSTGGHYRCQCPSGVTGKHCDV 200
++W + I Y C CP G+ G C V
Sbjct: 3695 EQWQLCIPSVHNSTYECVCPLGMEGDKCSV 3724
Score = 27.9 bits (59), Expect = 7.4
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 250 HYRCQCPSGVTGKHCDV 200
H++C+CPS +G C++
Sbjct: 3930 HFKCECPSRYSGNVCEI 3946
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 33.1 bits (72), Expect = 0.20
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCD 203
Y C+CP+G TGKHC+
Sbjct: 3969 YLCKCPNGFTGKHCE 3983
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 289 KRWTMSIVGSTGGHYRCQCPSGVTGKHCDV 200
++W + I Y C CP G+ G C V
Sbjct: 3695 EQWQLCIPSVHNSTYECVCPLGMEGDKCSV 3724
Score = 27.9 bits (59), Expect = 7.4
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 250 HYRCQCPSGVTGKHCDV 200
H++C+CPS +G C++
Sbjct: 3930 HFKCECPSRYSGNVCEI 3946
>U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical
protein F40F4.6 protein.
Length = 2214
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 244 RCQCPSGVTGKHC-DVIPANMTTTEASTVQEFTVEVITDDGSAENTSDKTTTVAEPNIDE 68
RCQCP G +G HC +++ +M+ + + VI ++ T + +D
Sbjct: 389 RCQCPEGFSGFHCQNILCTDMSGFDFNAENPTLTLVIRSRSQLSAVIEQATESVQSIVDL 448
Query: 67 NETE*IYNSLILILIF 20
+E Y S ++++F
Sbjct: 449 LASEPGYLSKFIVVLF 464
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -3
Query: 184 TTTEASTVQEFTVEVITDDGSAENTSDKTTTVAEPNIDE 68
TTTEA +E E I+DDG AE + + TTVA E
Sbjct: 589 TTTEAPE-EEDEAEYISDDGGAEESEEAETTVATTTTTE 626
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -3
Query: 184 TTTEASTVQEFTVEVITDDGSAENTSDKTTTVAEPNIDE 68
TTTEA +E E I+DDG AE + + TTVA E
Sbjct: 589 TTTEAPE-EEDEAEYISDDGGAEESEEAETTVATTTTTE 626
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 31.1 bits (67), Expect = 0.79
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 265 GSTGGHYRCQCPSGVTGKHCDVIPANMTTTE 173
G G H C CP+ TGK C+ T E
Sbjct: 310 GDFGSHLECACPASFTGKGCEFKNTGCKTCE 340
Score = 30.3 bits (65), Expect = 1.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCDV 200
Y+C+CP+G +GK C +
Sbjct: 49 YKCECPTGFSGKRCHI 64
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCDVIP 194
Y C CP GV+GK+C+ P
Sbjct: 278 YFCVCPPGVSGKNCESAP 295
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 256 GGHYRCQCPSGVTGKHCD 203
GG Y+C C SG TG C+
Sbjct: 237 GGAYKCVCKSGWTGPKCE 254
>Z68333-4|CAA92723.2| 271|Caenorhabditis elegans Hypothetical
protein C05C12.4 protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 241 CQCPSGVTGKHCDVIPANMTTTEASTVQE 155
C CP G G+ C++I N TT T+++
Sbjct: 103 CTCPPGFRGETCELIMENTVTTYWKTIKQ 131
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
protein F28B4.3 protein.
Length = 2229
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -3
Query: 241 CQCPSGVTGKHC-DVIPANMTTTEASTVQEFTVEVITDDGSAENTSDKTTTVAEPNIDEN 65
C+CP G TG HC +++ + + + VI + + T +DE
Sbjct: 393 CECPEGFTGFHCQNIVCPGASGIDFNAENPTVTLVIRSRSQLSDVIQQATNSVSRIVDEL 452
Query: 64 ETE*IYNSLILILIF 20
E Y + ++++F
Sbjct: 453 SAEPGYLTNFIVVLF 467
>Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical
protein F16B12.2 protein.
Length = 259
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 298 YMQKRWTMSIVGSTGGHYRCQCPSGVTGKHCD 203
Y Q + S V G RC+C G TGKHC+
Sbjct: 180 YCQNKGVCSFVD---GISRCRCAVGFTGKHCE 208
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 271 IVGSTGGHYRCQCPSGVTGKHCDV 200
+ +T Y C CP+G TGK+C +
Sbjct: 1767 VSSNTTAGYECICPAGKTGKNCQL 1790
Score = 27.5 bits (58), Expect = 9.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCDV 200
Y+C+C G G+HC++
Sbjct: 1273 YQCECKPGWIGRHCEI 1288
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 271 IVGSTGGHYRCQCPSGVTGKHCDV 200
+ +T Y C CP+G TGK+C +
Sbjct: 1767 VSSNTTAGYECICPAGKTGKNCQL 1790
Score = 27.5 bits (58), Expect = 9.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCDV 200
Y+C+C G G+HC++
Sbjct: 1273 YQCECKPGWIGRHCEI 1288
>Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical
protein F48C5.1 protein.
Length = 264
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 271 IVGSTGGHYRCQCPSGVTGKHCDVI 197
+V ++ GH+ C C G TG CD+I
Sbjct: 146 LVETSTGHFSCLCEVGWTGAACDMI 170
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = -3
Query: 253 GHYRCQCPSGVTGKHCDVIPANMTTTEASTVQEFTVEVITDDGSAENTSD 104
G +RC C G GK CD P NM Q+F E +DG+ +TSD
Sbjct: 386 GSFRCDCARGFGGKWCDE-PLNM-------CQDFHCE---NDGTCMHTSD 424
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = -3
Query: 253 GHYRCQCPSGVTGKHCDVIPANMTTTEASTVQEFTVEVITDDGSAENTSD 104
G +RC C G GK CD P NM Q+F E +DG+ +TSD
Sbjct: 386 GSFRCDCARGFGGKWCDE-PLNM-------CQDFHCE---NDGTCMHTSD 424
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 271 IVGSTGGHYRCQCPSGVTGKHCDV 200
+ +T Y C CP+G TGK+C +
Sbjct: 1786 VSSNTTAGYECICPAGKTGKNCQL 1809
Score = 27.5 bits (58), Expect = 9.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCDV 200
Y+C+C G G+HC++
Sbjct: 1273 YQCECKPGWIGRHCEI 1288
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 169 STVQEFTVEVITDDG-SAENTSDKTTTVAEPNIDENETE*IY 47
++VQE T+ ITD+G A+N S + + EP D T+ IY
Sbjct: 1301 TSVQE-TITTITDNGHDADNISTDSLVIHEPAADNQMTQSIY 1341
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 339 YIFPELNYCEDHPDTCKNGGQCQSLEAQADTIDASVLPE 223
Y E YC++ P C+NGG+C+ + ++ + + P+
Sbjct: 439 YCEEERYYCDETP--CENGGECEDIIGPPNSYNCTCTPQ 475
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 271 IVGSTGGHYRCQCPSGVTGKHC 206
+ S+GG Y C C +G G+ C
Sbjct: 113 VCSSSGGTYSCACATGFFGEQC 134
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 253 GHYRCQCPSGVTGKHCDVIPANMTTTE 173
G Y C+C G +GK+C++ T++
Sbjct: 183 GSYECKCLKGFSGKYCEIQDKKQCTSD 209
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -3
Query: 253 GHYRCQCPSGVTGKHCDVIPANMTTTEA-STVQEFTVEVITDDGSAEN 113
G Y C C SG G HC+ + T T FT I DG +++
Sbjct: 423 GQYFCHCTSGFGGVHCETVDEPSTPIPTLGTFPSFTTSGI--DGFSQS 468
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 253 GHYRCQCPSGVTGKHCD 203
G+ +C CP G G HC+
Sbjct: 145 GNVKCACPPGFVGDHCE 161
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 274 SIVGSTGGHYRCQCPSGVTGKHCDVIPA 191
S+V T +C+CPSG G C + A
Sbjct: 256 SLVNGTSRTTQCECPSGFMGADCKELQA 283
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +3
Query: 111 VFSADPSSVITSTVNSWTVLASVVVILAGMTSQCLPVTPEGH 236
+ + P+ + ++ + W + S V+LAG+ S P+TP +
Sbjct: 988 ILNPSPAMIPSTHMKKWCMELSKAVLLAGLGSSGSPITPSAN 1029
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +3
Query: 111 VFSADPSSVITSTVNSWTVLASVVVILAGMTSQCLPVTPEGH 236
+ + P+ + ++ + W + S V+LAG+ S P+TP +
Sbjct: 994 ILNPSPAMIPSTHMKKWCMELSKAVLLAGLGSSGSPITPSAN 1035
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +3
Query: 111 VFSADPSSVITSTVNSWTVLASVVVILAGMTSQCLPVTPEGH 236
+ + P+ + ++ + W + S V+LAG+ S P+TP +
Sbjct: 994 ILNPSPAMIPSTHMKKWCMELSKAVLLAGLGSSGSPITPSAN 1035
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCD 203
YRC CP GKHC+
Sbjct: 969 YRCDCPMEYEGKHCE 983
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCD 203
Y CQC S +G+HCD
Sbjct: 1312 YMCQCDSHFSGEHCD 1326
>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical protein
F20B10.1 protein.
Length = 1180
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -1
Query: 318 YCEDHPDTCKNGGQCQSLEAQADTIDASVLPESPASIVTSYQLI*PRPRLAPSKNSPWK 142
YC PD C+NGGQC + D S+ P + Y ++ P S PW+
Sbjct: 862 YCR--PDLCQNGGQCVD-KYDGYVCDCSMTPFGGSDCTKEYGMMVP---AGSSIQIPWQ 914
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 265 GSTGGHYRCQCPSGVTGKHCDV 200
G TG +CPSG G HCD+
Sbjct: 301 GFTGQRCEIECPSGFGGIHCDL 322
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 253 GHYRCQCPSGVTGKHCDV 200
G RC CP+G +G +C++
Sbjct: 427 GVIRCNCPNGFSGDYCEI 444
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 265 GSTGGHYRCQCPSGVTGKHCDV 200
G TG +CPSG G HCD+
Sbjct: 301 GFTGQRCEIECPSGFGGIHCDL 322
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 253 GHYRCQCPSGVTGKHCDV 200
G RC CP+G +G +C++
Sbjct: 427 GVIRCNCPNGFSGDYCEI 444
>U00036-3|AAT92065.1| 529|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform b protein.
Length = 529
Score = 29.1 bits (62), Expect = 3.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 244 RCQCPSGVTGKHCDVI 197
RC+CP G TG++C+ +
Sbjct: 348 RCRCPDGFTGQYCEQV 363
>U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform a protein.
Length = 592
Score = 29.1 bits (62), Expect = 3.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 244 RCQCPSGVTGKHCDVI 197
RC+CP G TG++C+ +
Sbjct: 348 RCRCPDGFTGQYCEQV 363
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 265 GSTGGHYRCQCPSGVTGKHCDV 200
G TG +CPSG G HCD+
Sbjct: 301 GFTGQRCEIECPSGFGGIHCDL 322
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 253 GHYRCQCPSGVTGKHCDV 200
G RC CP+G +G +C++
Sbjct: 427 GVIRCNCPNGFSGDYCEI 444
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +3
Query: 111 VFSADPSSVITSTVNSWTVLASVVVILAGMTSQCLPVTPEGH 236
+ + P+ + ++ + W + S V+LAG+ S P+TP +
Sbjct: 994 ILNPSPAMIPSTHMKKWCMELSKAVLLAGLGSSGSPITPSAN 1035
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 244 RCQCPSGVTGKHCDVIPAN 188
+C CPSG TG+ C+ I N
Sbjct: 610 KCDCPSGYTGEKCEQICRN 628
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 244 RCQCPSGVTGKHCDVIPAN 188
+C CPSG TG+ C+ I N
Sbjct: 610 KCDCPSGYTGEKCEQICRN 628
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCD 203
YRC CP GKHC+
Sbjct: 969 YRCDCPMEYEGKHCE 983
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCD 203
Y CQC S +G+HCD
Sbjct: 1312 YMCQCDSHFSGEHCD 1326
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -3
Query: 241 CQCPSGVTGKHCDVIPANMT--TTEASTVQEF--TVEVITDDGSAENTSDKTTTVAE 83
C CP G G+ C++ + T E VQEF T V+ S S T V E
Sbjct: 1662 CVCPPGFYGRQCEINECSETCWNGETCAVQEFGSTTNVVCHCPSNYTQSSCATNVCE 1718
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 241 CQCPSGVTGKHCD 203
C CPSG TG HC+
Sbjct: 1822 CICPSGFTGDHCE 1834
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 241 CQCPSGVTGKHCDVIPA 191
CQCP G+ G++C+ I A
Sbjct: 1974 CQCPQGLGGEYCEKITA 1990
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 253 GHYRCQCPSGVTGKHCDV-IPANMTTTEASTVQEFTVEVITDDGSAENTSDKTT 95
G + CQC SG G C + A T E +E I D + +++SD TT
Sbjct: 137 GGFECQCQSGYHGSLCQYHMSACSKTFELCGPHGHCIESIVDP-TGQSSSDTTT 189
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 253 GHYRCQCPSGVTGKHCDV-IPANMTTTEASTVQEFTVEVITDDGSAENTSDKTT 95
G + CQC SG G C + A T E +E I D + +++SD TT
Sbjct: 137 GGFECQCQSGYHGSLCQYHMSACSKTFELCGPHGHCIESIVDP-TGQSSSDTTT 189
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
protein F45E4.4 protein.
Length = 2361
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 175 EASTVQEFTVEVITDDGSAENTSDKTTTVAEPNIDENET 59
+A T E V+ I D+ E DKT T EPN+ T
Sbjct: 256 KAKTATETLVKEIKDEVIVEVDKDKTETKPEPNVSNELT 294
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 241 CQCPSGVTGKHCD-VIPANMTTTEASTVQE 155
C CP G++G++C+ V P+N +E
Sbjct: 334 CACPEGLSGRYCEQVYPSNAQCARGKLTRE 363
>AJ561217-1|CAD99197.1| 210|Caenorhabditis elegans NAS-28 protein
protein.
Length = 210
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 271 IVGSTGGHYRCQCPSGVTGKHCDVIPANMTTTEASTVQEFTVEVITDDGSAENTS 107
I S G+ +C+CP TG CD +P+ V + T T D A + S
Sbjct: 139 ITDSRNGN-QCKCPRYFTGASCDSLPSGTAPNCNGAVLQATSSWETFDAKAGDPS 192
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCDVIPANMTTTE 173
Y C+C +G GK+CDV N E
Sbjct: 659 YFCECANGFGGKNCDVSIGNTPPEE 683
>Z37092-10|CAA85459.1| 280|Caenorhabditis elegans Hypothetical
protein F44F4.10 protein.
Length = 280
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 336 IFPELNYCEDHPD-TCKNGGQCQSLEAQADTID 241
++ LN + PD CK+ GQC + QA+++D
Sbjct: 13 LYKPLNLIKSKPDGCCKHNGQCPYGKNQAESVD 45
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 184 TTTEASTVQEFTVEVITDDGSAENTSDKTTTVAEPNIDENET 59
TTT +T ++ T + T+ + ++ TT +EP+ E+ T
Sbjct: 823 TTTTTTTTEKTTSKTTTEKPTTSESATTETTTSEPSTTESTT 864
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 244 RCQCPSGVTGKHCD 203
+CQC GVTG+ CD
Sbjct: 405 KCQCKPGVTGRFCD 418
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 244 RCQCPSGVTGKHCD 203
+CQC GVTG+ CD
Sbjct: 949 QCQCKPGVTGQRCD 962
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCDVIPANMTTTE 173
Y C+C +G GK+CDV N E
Sbjct: 659 YFCECANGFGGKNCDVSIGNTPPEE 683
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 247 YRCQCPSGVTGKHCDVIPANMTTTE 173
Y C+C +G GK+CDV N E
Sbjct: 659 YFCECANGFGGKNCDVSIGNTPPEE 683
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 250 HYRCQCPSGVTGKHCDVI 197
+Y C C SG TG++CD +
Sbjct: 460 NYTCTCDSGWTGENCDTM 477
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = -3
Query: 262 STGGHYRCQCPSGVT--GKHC 206
STG +RC C SG T GK+C
Sbjct: 967 STGATFRCVCQSGYTGDGKYC 987
>Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical
protein C17G1.6b protein.
Length = 685
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 244 RCQCPSGVTGKHCDVI 197
RC+CPSG G +C+ +
Sbjct: 330 RCRCPSGYGGTYCETV 345
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 244 RCQCPSGVTGKHCDVI 197
RC+CPSG G +C+ +
Sbjct: 330 RCRCPSGYGGTYCETV 345
>U64856-1|AAB04985.2| 429|Caenorhabditis elegans Hypothetical
protein T25F10.3 protein.
Length = 429
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = -3
Query: 298 YMQKRWTMSIVGSTGGHY---RCQCPSGVTGKHCDV 200
+ Q +V GGH RC CP G HC++
Sbjct: 197 FYQGETCSDLVCLNGGHEFRGRCSCPHNFVGYHCEI 232
>U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical
protein C06G1.2 protein.
Length = 182
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 199 IPANMTTTEASTVQEFTVEVITDDGSAENTSDKTTT 92
+ + TTTEA+T + T T + A T + TTT
Sbjct: 92 VESTTTTTEATTTEAATTTTTTTEEPATTTKEITTT 127
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 223 VTGKHCDVIPANMTTTEASTVQEFT--VEVITDDGSAENTSDKTTTVAEPNIDENET 59
V G ++ A+ T +TV E T V+ T + T++ TTTVAE + T
Sbjct: 32 VEGSGVEIEKASTTEATTTTVVETTTTVDSTTTEVETTPTTEATTTVAETTTEAETT 88
>U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical
protein T13C2.3a protein.
Length = 431
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 199 IPANMTTTEASTVQEFTVEVITDDGSAENTSDKTTTVAEPN 77
IP + T+T ST T T++ + TS TTT EP+
Sbjct: 315 IPPSTTSTTTSTTTT-TTTTTTEEPTTTTTSAPTTTTPEPS 354
>U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical
protein T13C2.3b protein.
Length = 506
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 199 IPANMTTTEASTVQEFTVEVITDDGSAENTSDKTTTVAEPN 77
IP + T+T ST T T++ + TS TTT EP+
Sbjct: 390 IPPSTTSTTTSTTTT-TTTTTTEEPTTTTTSAPTTTTPEPS 429
>U10414-12|AAA19079.3| 497|Caenorhabditis elegans Nematode astacin
protease protein28 protein.
Length = 497
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 244 RCQCPSGVTGKHCDVIPANMTTTEASTVQEFTVEVITDDGSAENTS 107
+C+CP TG CD +P+ V + T T D A + S
Sbjct: 341 QCKCPRYFTGASCDSLPSGTAPNCNGAVLQATSSWETFDAKAGDPS 386
>AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular
matrix metalloproteaseprotein.
Length = 685
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 244 RCQCPSGVTGKHCDVI 197
RC+CPSG G +C+ +
Sbjct: 330 RCRCPSGYGGTYCETV 345
>AL117200-7|CAB55059.1| 221|Caenorhabditis elegans Hypothetical
protein Y50E8A.11 protein.
Length = 221
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = -3
Query: 238 QCPSGVTGKHCDVIPANMTTTEASTVQEFTVEVITDDGSAENTSDKTTTVAEPNIDENET 59
+C +G GK C TTT ST E T T S ++ VA
Sbjct: 94 ECDAGFNGKSCQE-KTTSTTTTTSTTTEITTTTTTVLISEVPSTTPIIKVAAFQQSNPSN 152
Query: 58 E*IYNSLILILI 23
+Y+ LIL+++
Sbjct: 153 IVLYSVLILVIV 164
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -2
Query: 185 DHDRG*HRPRIHRGSDHRRWVRRE--YFRQDYNSR*TQYRRERD 60
D D HRP H DH+ RR+ + +D N R RR ++
Sbjct: 134 DRDHRQHRPTSHHHRDHKDHHRRDDKHHHRDSNHRHAHKRRHQE 177
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = -3
Query: 184 TTTEASTVQEFTVEV----ITDDGSAENTSDKTTTVAEPNIDENET 59
TTTE T E T+E T+ S T TTT A+P + T
Sbjct: 273 TTTEEVTTTETTIEAQTTTTTERMSPSTTKTSTTTTAKPTTTRSTT 318
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 123 DPSSVITSTVNSWTVL-ASVVVILAGMTSQCLPVTPEG 233
D SS+ + + NSWT +S ++ MT C P TP G
Sbjct: 194 DISSLTSDSSNSWTASNSSGPMLTMAMTKSC-PTTPRG 230
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 123 DPSSVITSTVNSWTVL-ASVVVILAGMTSQCLPVTPEG 233
D SS+ + + NSWT +S ++ MT C P TP G
Sbjct: 262 DISSLTSDSSNSWTASNSSGPMLTMAMTKSC-PTTPRG 298
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 184 TTTEASTVQEFTVEVITDDGSAENTSDKTTTVAEPNIDENET 59
TTT +T E T T+ + T+ TTT P ET
Sbjct: 98 TTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTET 139
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 123 DPSSVITSTVNSWTVL-ASVVVILAGMTSQCLPVTPEG 233
D SS+ + + NSWT +S ++ MT C P TP G
Sbjct: 194 DISSLTSDSSNSWTASNSSGPMLTMAMTKSC-PTTPRG 230
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 123 DPSSVITSTVNSWTVL-ASVVVILAGMTSQCLPVTPEG 233
D SS+ + + NSWT +S ++ MT C P TP G
Sbjct: 262 DISSLTSDSSNSWTASNSSGPMLTMAMTKSC-PTTPRG 298
>Z68104-7|CAI79159.1| 1086|Caenorhabditis elegans Hypothetical
protein F08B12.3c protein.
Length = 1086
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 277 LSTVFACIRMVFTVI*FW 330
L T+FACI MV+T++ F+
Sbjct: 106 LQTMFACISMVYTILVFY 123
>Z68104-4|CAA92116.1| 1107|Caenorhabditis elegans Hypothetical
protein F08B12.3b protein.
Length = 1107
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 277 LSTVFACIRMVFTVI*FW 330
L T+FACI MV+T++ F+
Sbjct: 127 LQTMFACISMVYTILVFY 144
>Z68104-3|CAA92115.1| 1119|Caenorhabditis elegans Hypothetical
protein F08B12.3a protein.
Length = 1119
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 277 LSTVFACIRMVFTVI*FW 330
L T+FACI MV+T++ F+
Sbjct: 127 LQTMFACISMVYTILVFY 144
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 268 VGSTGGHYRCQCPSGVTGKHCD 203
+G G ++CQC G G +CD
Sbjct: 1802 IGEKLGRFKCQCVPGWEGPNCD 1823
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 262 STGGHYRCQCPSGVTGKHCDVI 197
S G RC CP G++G C+ +
Sbjct: 67 SAKGTVRCHCPYGLSGDRCEKV 88
>AF232770-1|AAF37866.1| 1107|Caenorhabditis elegans SLO-2 potassium
channel protein.
Length = 1107
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 277 LSTVFACIRMVFTVI*FW 330
L T+FACI MV+T++ F+
Sbjct: 127 LQTMFACISMVYTILVFY 144
>AF173828-1|AAD51350.1| 1119|Caenorhabditis elegans putative
potassium channel Slo-2 protein.
Length = 1119
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 277 LSTVFACIRMVFTVI*FW 330
L T+FACI MV+T++ F+
Sbjct: 127 LQTMFACISMVYTILVFY 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,906,082
Number of Sequences: 27780
Number of extensions: 338329
Number of successful extensions: 1575
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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