Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0123
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111748-1|AAI11749.1| 1007|Homo sapiens roundabout homolog 4, m...    30   9.1  
BC111562-1|AAI11563.1| 1007|Homo sapiens roundabout homolog 4, m...    30   9.1  
BC064643-1|AAH64643.1|  436|Homo sapiens ROBO4 protein protein.        30   9.1  
BC039602-1|AAH39602.1| 1007|Homo sapiens roundabout homolog 4, m...    30   9.1  
AY358083-1|AAQ88450.1| 1004|Homo sapiens magic roundabout protein.     30   9.1  
AK074163-1|BAB84989.1|  702|Homo sapiens FLJ00236 protein protein.     30   9.1  
AK000805-1|BAA91382.1|  417|Homo sapiens protein ( Homo sapiens ...    30   9.1  
AF361473-1|AAL31867.1| 1007|Homo sapiens magic roundabout protein.     30   9.1  

>BC111748-1|AAI11749.1| 1007|Homo sapiens roundabout homolog 4,
           magic roundabout (Drosophila) protein.
          Length = 1007

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -2

Query: 373 RVCSIFSTHST*KSPSWGLIVDLVV*WVGPKILGPAVCSHTMQIVESHIPRAP 215
           R C + +  S   S S G +   +V W   + LGP + S + ++V  H+P AP
Sbjct: 669 RACELGNRGSKNLSQSPGAVPQALVAW---RALGPKLLSSSNELVTRHLPPAP 718


>BC111562-1|AAI11563.1| 1007|Homo sapiens roundabout homolog 4,
           magic roundabout (Drosophila) protein.
          Length = 1007

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -2

Query: 373 RVCSIFSTHST*KSPSWGLIVDLVV*WVGPKILGPAVCSHTMQIVESHIPRAP 215
           R C + +  S   S S G +   +V W   + LGP + S + ++V  H+P AP
Sbjct: 669 RACELGNRGSKNLSQSPGAVPQALVAW---RALGPKLLSSSNELVTRHLPPAP 718


>BC064643-1|AAH64643.1|  436|Homo sapiens ROBO4 protein protein.
          Length = 436

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -2

Query: 373 RVCSIFSTHST*KSPSWGLIVDLVV*WVGPKILGPAVCSHTMQIVESHIPRAP 215
           R C + +  S   S S G +   +V W   + LGP + S + ++V  H+P AP
Sbjct: 98  RACELGNRGSKNLSQSPGAVPQALVAW---RALGPKLLSSSNELVTRHLPPAP 147


>BC039602-1|AAH39602.1| 1007|Homo sapiens roundabout homolog 4,
           magic roundabout (Drosophila) protein.
          Length = 1007

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -2

Query: 373 RVCSIFSTHST*KSPSWGLIVDLVV*WVGPKILGPAVCSHTMQIVESHIPRAP 215
           R C + +  S   S S G +   +V W   + LGP + S + ++V  H+P AP
Sbjct: 669 RACELGNRGSKNLSQSPGAVPQALVAW---RALGPKLLSSSNELVTRHLPPAP 718


>AY358083-1|AAQ88450.1| 1004|Homo sapiens magic roundabout protein.
          Length = 1004

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -2

Query: 373 RVCSIFSTHST*KSPSWGLIVDLVV*WVGPKILGPAVCSHTMQIVESHIPRAP 215
           R C + +  S   S S G +   +V W   + LGP + S + ++V  H+P AP
Sbjct: 666 RACELGNRGSKNLSQSPGAVPQALVAW---RALGPKLLSSSNELVTRHLPPAP 715


>AK074163-1|BAB84989.1|  702|Homo sapiens FLJ00236 protein protein.
          Length = 702

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -2

Query: 373 RVCSIFSTHST*KSPSWGLIVDLVV*WVGPKILGPAVCSHTMQIVESHIPRAP 215
           R C + +  S   S S G +   +V W   + LGP + S + ++V  H+P AP
Sbjct: 559 RACELGNRGSKNLSQSPGAVPQALVAW---RALGPKLLSSSNELVTRHLPPAP 608


>AK000805-1|BAA91382.1|  417|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20798 fis, clone ADSU02031. ).
          Length = 417

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -2

Query: 373 RVCSIFSTHST*KSPSWGLIVDLVV*WVGPKILGPAVCSHTMQIVESHIPRAP 215
           R C + +  S   S S G +   +V W   + LGP + S + ++V  H+P AP
Sbjct: 153 RACELGNRGSKNLSQSPGAVPQALVAW---RALGPKLLSSSNELVTRHLPPAP 202


>AF361473-1|AAL31867.1| 1007|Homo sapiens magic roundabout protein.
          Length = 1007

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -2

Query: 373 RVCSIFSTHST*KSPSWGLIVDLVV*WVGPKILGPAVCSHTMQIVESHIPRAP 215
           R C + +  S   S S G +   +V W   + LGP + S + ++V  H+P AP
Sbjct: 669 RACELGNRGSKNLSQSPGAVPQALVAW---RALGPKLLSSSNELVTRHLPPAP 718


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,112,374
Number of Sequences: 237096
Number of extensions: 2203097
Number of successful extensions: 2538
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2538
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)