Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0122
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens ...    32   2.3  

>AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46559 fis, clone THYMU3040126. ).
          Length = 303

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
 Frame = +2

Query: 359 HTHVSIKKSHRWRCI--K*YVYFCLILC---WLHPTHFCICVSYLSFFPLHPV*NTTILK 523
           HTH+ I   H   C+  + Y Y C+ +C   ++H TH C+CV    +  ++    T I  
Sbjct: 88  HTHIYI---HMCVCVYTRIYTYTCVCVCTHAYIH-THVCVCVHTHIYIHMYVCVYTRIYT 143

Query: 524 KFSL---QKHYRHCHVF-DEHTQISIFGYC*SVVQLRIDLYWLSIVYVWWHI 667
              +      Y H HV+   HT I I   C   V  RI  Y    V V  HI
Sbjct: 144 YTCVCVCTHAYIHTHVYVCVHTHIYIH-MC-VCVYTRIYTYTCMCVCVHTHI 193


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,275,412
Number of Sequences: 237096
Number of extensions: 1987092
Number of successful extensions: 7444
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 7367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7443
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)