Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0121
(529 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 123 2e-27
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 112 5e-24
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 112 5e-24
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 99 3e-20
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 92 6e-18
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 77 2e-13
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 72 9e-12
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 70 3e-11
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 70 3e-11
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 68 2e-10
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 68 2e-10
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 66 6e-10
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 62 1e-08
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 60 3e-08
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 52 1e-05
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 50 4e-05
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 48 2e-04
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 44 0.002
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 44 0.002
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 44 0.003
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 43 0.004
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 40 0.047
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 38 0.19
UniRef50_A1HIY8 Cluster: Na+/solute symporter; n=10; Proteobacte... 37 0.25
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 36 0.44
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 36 0.58
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 36 0.58
UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, L... 33 3.1
UniRef50_Q28WE4 Cluster: Auxin Efflux Carrier; n=23; Rhodobacter... 33 5.4
UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein ... 33 5.4
UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2; Anaer... 32 7.1
UniRef50_Q4DE93 Cluster: Putative uncharacterized protein; n=3; ... 32 7.1
UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia fuc... 32 7.1
UniRef50_Q2BD42 Cluster: ABC transporter permease; n=1; Bacillus... 32 9.4
UniRef50_Q58AA0 Cluster: Putative uncharacterized protein srxa-1... 32 9.4
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 123 bits (297), Expect = 2e-27
Identities = 57/82 (69%), Positives = 61/82 (74%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+IKKPV VHSR RVRKNTEARRKGRHCGFGKR+GTANARMP K LW
Sbjct: 45 IKDGLIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRR 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRHLYH LYM+
Sbjct: 105 LLKKYRDSKKIDRHLYHDLYMK 126
Score = 63.7 bits (148), Expect = 3e-09
Identities = 34/73 (46%), Positives = 40/73 (54%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLL 432
+ KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ L+
Sbjct: 126 KCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELI 185
Query: 433 QTFAREDEAALTA 471
A+EDE A A
Sbjct: 186 ALHAKEDEIAAKA 198
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 112 bits (269), Expect = 5e-24
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 37 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 96
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 97 LLRRYRESKKIDRHMYHSLYLK 118
Score = 55.2 bits (127), Expect = 9e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 118 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 112 bits (269), Expect = 5e-24
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 45 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 105 LLRRYRESKKIDRHMYHSLYLK 126
Score = 55.2 bits (127), Expect = 9e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 126 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 99 bits (238), Expect = 3e-20
Identities = 47/81 (58%), Positives = 54/81 (66%)
Frame = +2
Query: 14 KDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXX 193
KD L+I+KPV VHSR+R RKN ARRKGRH G GKR+GTA+ARMPQK LW
Sbjct: 46 KDNLIIRKPVTVHSRSRCRKNLIARRKGRHTGTGKRKGTADARMPQKVLWMRRMRVLRRL 105
Query: 194 XXXXXTAKKIDRHLYHSLYMR 256
A KID+HLYH LY +
Sbjct: 106 LKRYREAHKIDKHLYHLLYQQ 126
Score = 53.2 bits (122), Expect = 4e-06
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +1
Query: 241 LTLHEAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
L + KGN FKNKRVL+++IH+KKAE+ R K LSDQ
Sbjct: 122 LLYQQCKGNQFKNKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 92.3 bits (219), Expect = 6e-18
Identities = 44/84 (52%), Positives = 51/84 (60%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDG +I+KPV VHSRAR RK EA+ GRH G G+R G+ ARMP KELW
Sbjct: 65 IKDGFIIRKPVKVHSRARWRKMKEAKDMGRHNGVGRREGSREARMPSKELWMRRLRILRR 124
Query: 191 XXXXXXTAKKIDRHLYHSLYMRRR 262
KKIDRH+Y LYMR +
Sbjct: 125 LLRKYRADKKIDRHVYRDLYMRAK 148
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +1
Query: 256 AKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
AKGNVF+NKR L+E+IH+ K EK + + L++Q
Sbjct: 147 AKGNVFRNKRNLVEHIHKIKNEKKKERQLAEQ 178
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 77.4 bits (182), Expect = 2e-13
Identities = 33/70 (47%), Positives = 43/70 (61%)
Frame = +2
Query: 47 VHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKID 226
+HSRAR + A+R GRH G+GKRRGT AR+P K LW AKKID
Sbjct: 77 IHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKID 136
Query: 227 RHLYHSLYMR 256
+H+YHS+Y++
Sbjct: 137 KHMYHSMYLK 146
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 146 KCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 71.7 bits (168), Expect = 9e-12
Identities = 37/82 (45%), Positives = 47/82 (57%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
I+DGL+I KPV VHS+A KNT KGRH GK +GTAN +P++ W
Sbjct: 45 IEDGLIIWKPVTVHSQAHCEKNT---LKGRHMVIGKGKGTANIWVPERVTWMRRMSILHR 101
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKID H+ HSLY+R
Sbjct: 102 LLRRYCESKKIDCHMCHSLYLR 123
Score = 42.7 bits (96), Expect = 0.005
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +1
Query: 259 KGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
K NVFKN+ +LME IH+ KA+KA K+L+DQ
Sbjct: 125 KRNVFKNQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 70.1 bits (164), Expect = 3e-11
Identities = 34/84 (40%), Positives = 44/84 (52%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
I+ ++ K + SR R+R A+R GRH G GKRRGT ARMP K LW
Sbjct: 45 IESKIIAKLDIKGSSRGRIRARHAAKRLGRHSGHGKRRGTREARMPSKTLWIQRQRVLRR 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMRRR 262
+KIDRHLY +LY + +
Sbjct: 105 LLSRYRDDEKIDRHLYETLYAKAK 128
Score = 33.5 bits (73), Expect = 3.1
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+AKGN+FKNKRVL+E+I + E+ K ++
Sbjct: 126 KAKGNMFKNKRVLLEHIVGMQKEQELEKKKKEE 158
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 70.1 bits (164), Expect = 3e-11
Identities = 36/84 (42%), Positives = 45/84 (53%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IK+G++ KKPV SR R R E ++KGRH G G R+G ARM +KELW
Sbjct: 45 IKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRK 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMRRR 262
KKIDR Y LY+R +
Sbjct: 105 ELRKLKEQKKIDRRTYRMLYIRAK 128
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
I+DG ++KK HSR R+R E + GRH G GKR+G+ N+R K +W
Sbjct: 45 IRDGFILKKKDKNHSRNRIRSRKEEIKLGRHEGLGKRKGSKNSRYSIKLIWIIRIRVMRN 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMRRR 262
+ K++RHLY SLY++ +
Sbjct: 105 LLKRLRNSSKLNRHLYRSLYLKSK 128
Score = 40.3 bits (90), Expect = 0.027
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
++KGNVFKNK++L E+IH+ K E+ R + D+
Sbjct: 126 KSKGNVFKNKKILTEFIHKAKNEQKRKEEFLDK 158
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/51 (60%), Positives = 37/51 (72%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 163
IKD ++I K SR R RK EA++KGRH G GKR GTANARMPQK++W
Sbjct: 45 IKDNVIIMKQDKHTSRGRCRKRLEAKKKGRHMGTGKRFGTANARMPQKKIW 95
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 65.7 bits (153), Expect = 6e-10
Identities = 43/95 (45%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = -2
Query: 327 GLLSLLPVDVLHEHTLVLEHITLRL-M*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSF 151
GL+ L VDVLHE+ L LE+I L + Y +++ L RS R L L +F
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH-RILILLIQVTF 123
Query: 150 CGIRALAVPLLLPKPQ*RPFLRASVFLRTRAREWT 46
GI+ALAVP L P PF R+ VF R RAREWT
Sbjct: 124 SGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 61.7 bits (143), Expect = 1e-08
Identities = 34/80 (42%), Positives = 41/80 (51%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IK+G++ KK S ARV+K E R+KGR G G RRG A AR P KE W
Sbjct: 47 IKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRK 106
Query: 191 XXXXXXTAKKIDRHLYHSLY 250
+ KIDR +Y LY
Sbjct: 107 TLKQLRDSGKIDRKVYRKLY 126
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +2
Query: 20 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXX 199
GL+I+KPV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLR 562
Query: 200 XXXTAKKIDRHLYHSLYMR 256
+KKIDR +YHSL ++
Sbjct: 563 RYRESKKIDRRMYHSLDLK 581
Score = 43.2 bits (97), Expect = 0.004
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNK L+++IH+ KA++A K+L+DQ
Sbjct: 581 KVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/70 (37%), Positives = 37/70 (52%)
Frame = +2
Query: 254 RRRVMCSRTSVCSWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRHASAARNVLPPRRRNCC 433
+RR MCS+T SW+TST PA ++ R+HASAA++ PR+R
Sbjct: 3 KRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRKSS 62
Query: 434 RPSLEKTKPR 463
R S + +PR
Sbjct: 63 RLSPRRKRPR 72
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 49.6 bits (113), Expect = 4e-05
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 163
I +G++ +P SR+R RK + KGR G G R+G+ANAR P+K W
Sbjct: 50 IDEGVIKARPFVGTSRSRARKAAAQKAKGRRSGQGSRKGSANARNPRKSRW 100
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 47.6 bits (108), Expect = 2e-04
Identities = 27/82 (32%), Positives = 35/82 (42%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IK G++ K P+ SR R R+ E ++KGR G G R+G AR K W
Sbjct: 44 IKRGIIKKLPIEGQSRKRARELHEKKKKGRRRGPGSRKGKRTARADPKRQWINKVRAQRK 103
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
K ID Y LY +
Sbjct: 104 LLKELKEKKIIDNKTYWDLYKK 125
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 44.0 bits (99), Expect = 0.002
Identities = 25/76 (32%), Positives = 32/76 (42%)
Frame = +2
Query: 23 LVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXX 202
++ KK +S R++K E KGR G G RGT AR P+K W
Sbjct: 48 IIQKKQKKGNSNYRLKKRIEQLAKGRRRGEGSVRGTKYARFPRKRRWISRIRALRRELRE 107
Query: 203 XXTAKKIDRHLYHSLY 250
T KID+ Y Y
Sbjct: 108 LKTNNKIDKKTYRRYY 123
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = +2
Query: 86 RRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYM 253
RRKGR G G+R+G A AR+ KE W + IDR Y LYM
Sbjct: 71 RRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYM 126
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 43.6 bits (98), Expect = 0.003
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = -2
Query: 417 LGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRL 253
+GGN + LA LL +AA L L+ L LL L DVL E+ L+LEH+TL L
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSL 105
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 43.2 bits (97), Expect = 0.004
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANAR-MPQKELWXXXXXXXX 187
+K+GL+ KP +SR R R E R+ GR G G RRGT AR KE+W
Sbjct: 41 MKEGLIEVKPRKRNSRGRWRITHEKRKSGRRRGRGSRRGTRKARGAVGKEVWVPRIRRIR 100
Query: 188 XXXXXXXTAKKIDRHLYHSLY 250
ID+ + +LY
Sbjct: 101 RFLNTLKHRGVIDKATWRNLY 121
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 39.5 bits (88), Expect = 0.047
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 11 IKDG-LVIKKPVAVHSRARVRKNTEARR-KGRHCGFGKRRGTANARMPQKELWXXXXXXX 184
IKDG +++ K V + S R+++ + R K G R+G AR K++W
Sbjct: 45 IKDGKIIVLKKVGI-SGGRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMWVKRVRKI 103
Query: 185 XXXXXXXXTAKKIDRHLYHSLYMRRR 262
K IDRH Y LY++ +
Sbjct: 104 RAYLKWLRDHKVIDRHTYRELYLKTK 129
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 37.5 bits (83), Expect = 0.19
Identities = 27/80 (33%), Positives = 40/80 (50%)
Frame = -1
Query: 250 VE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTSSLTKATVTTLSTCLCVF 71
V+ V+ V LL V E+ NP +P LL + +GST L A + L + VF
Sbjct: 69 VQAVIRTIVTLLRFLVSPEKPVQNPHPSHPGPLLGYQNVGSTLPLPYAHMPALPSSQGVF 128
Query: 70 ADTGAGVDCYRFLDDETILD 11
+ G+D ++ LDD+ I D
Sbjct: 129 SVVSPGMDGHKILDDQRIFD 148
>UniRef50_A1HIY8 Cluster: Na+/solute symporter; n=10;
Proteobacteria|Rep: Na+/solute symporter - Ralstonia
pickettii 12J
Length = 476
Score = 37.1 bits (82), Expect = 0.25
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = -2
Query: 405 TFLAALACLLYFIAAG-LSLVAKHLRPGLLSL--LPVDVLHEHTLVLEHITLRLM*SEWY 235
+ +AA+ C+ IA G + + AK+L PG+ SL LPV + H H L+ +T L+ S +
Sbjct: 264 SLMAAVLCVPISIALGFIGVAAKYLYPGIKSLYALPVFLQHMHPLLAGVVTTSLVASIFV 323
Query: 234 RCLSIFLAV 208
++ LA+
Sbjct: 324 SVCTVALAI 332
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 36.3 bits (80), Expect = 0.44
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 14 KDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 163
K ++IKK + S R + ++ G G G+R+GT NAR K LW
Sbjct: 45 KKRIIIKKTIKGVSSYRKKLRKAKKQSGLKRGIGRRKGTKNARKKYKILW 94
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 35.9 bits (79), Expect = 0.58
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 253 EAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNV K +KR+ E+I + KA+ A+ K+LSDQ
Sbjct: 119 KVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 35.9 bits (79), Expect = 0.58
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+AKG VFKNK +L+E+ ++ KA+K K+L+ Q
Sbjct: 73 KAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQ 105
>UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, LytS
precursor; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Signal transduction histidine kinase, LytS precursor -
Alkaliphilus metalliredigens QYMF
Length = 572
Score = 33.5 bits (73), Expect = 3.1
Identities = 20/90 (22%), Positives = 43/90 (47%)
Frame = -2
Query: 471 SGKRGFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLH 292
+G +FS++G FL++ TFL ++ ++F GL + R G L ++ +
Sbjct: 133 NGYFSIIFSTKGPMFFLMVASGTFLGIIS--IFFYLRGLLRTSGFHRQGYLIMIIASLFP 190
Query: 291 EHTLVLEHITLRLM*SEWYRCLSIFLAVLY 202
T+ L + + +++ +S+ +LY
Sbjct: 191 WVTVYLNAMNKSFLGIDYFPVVSVLSGILY 220
>UniRef50_Q28WE4 Cluster: Auxin Efflux Carrier; n=23;
Rhodobacterales|Rep: Auxin Efflux Carrier - Jannaschia
sp. (strain CCS1)
Length = 313
Score = 32.7 bits (71), Expect = 5.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -3
Query: 293 MSTRLFLNTLPFASCRVSGIDACQSSWQFCTSGAIFLEPFVF 168
M +FL TLPF + G AC++ + F + A +L FVF
Sbjct: 1 MMLEIFLKTLPFFALIALGFQACRTGF-FTSEAAAYLTKFVF 41
>UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Shewanella loihica PV-4|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Shewanella loihica (strain BAA-1088 / PV-4)
Length = 718
Score = 32.7 bits (71), Expect = 5.4
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -2
Query: 423 LLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHI 265
L LG +T+L A A L+ ++ GL+ A +RPGL+ LL ++ ++ H + E I
Sbjct: 553 LNLGNDTYLEATARLMDTLSRGLAGEAYLIRPGLI-LLTLNEVNAHQALQERI 604
>UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2;
Anaeromyxobacter|Rep: Polysulphide reductase NrfD -
Anaeromyxobacter sp. Fw109-5
Length = 417
Score = 32.3 bits (70), Expect = 7.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 459 GFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLS 316
G V +G + +L GG + A +A LL +A G + A +R GL++
Sbjct: 3 GVVEFVKGCARLVLTGGRAYKAWMAALLALVAIGATAYAHQMRAGLIA 50
>UniRef50_Q4DE93 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 745
Score = 32.3 bits (70), Expect = 7.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -2
Query: 303 DVLHEHTLVLEHITLRLM*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSF-CGIRALAV 127
DV H +L E + M W+ C ++F+ + + N +C C HS GIR L
Sbjct: 14 DVCHRISLFSERVGA--MRDAWFSCRTLFIFLFFKYINIYIYICFCMHSRVGAGIRDLQF 71
Query: 126 PL 121
L
Sbjct: 72 SL 73
>UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 72
Score = 32.3 bits (70), Expect = 7.1
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +1
Query: 25 RHQETCSSPL-PRPCPQKHRG-T*KGS-SLWLW*EK 123
RH TC+ P P CP H+G +GS S+WLW EK
Sbjct: 2 RHDTTCTPPFRPSICP-SHKGIASRGSGSMWLWGEK 36
>UniRef50_Q2BD42 Cluster: ABC transporter permease; n=1; Bacillus
sp. NRRL B-14911|Rep: ABC transporter permease -
Bacillus sp. NRRL B-14911
Length = 400
Score = 31.9 bits (69), Expect = 9.4
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = -2
Query: 375 YFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLM*S---EWYRCLSIFLAVL 205
Y AG+ LVA +LRP + SL P+ + + + L H + L+ S + +S + +
Sbjct: 16 YLFIAGIILVAFNLRPAITSLGPLVGIIQDDVGLAHWSAGLLMSLPLLVFAFMSPLVPKI 75
Query: 204 YFRSNFLRTLCLCTHSSFCGIRALAVPL 121
R RTL + S F GI ++P+
Sbjct: 76 ALRLTNERTLLIGLLSLFTGIAIRSIPM 103
>UniRef50_Q58AA0 Cluster: Putative uncharacterized protein srxa-13;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein srxa-13 - Caenorhabditis elegans
Length = 310
Score = 31.9 bits (69), Expect = 9.4
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = -3
Query: 335 FVLAFSAFFLWMYSMSTRLFLNTLPFASCRVSGIDACQSSWQFCTSGAIFLEPFVFVPIV 156
F+ A+ FL + +S R++ PF S + W +C A+FL F+P
Sbjct: 92 FIYAYP-MFLTILMISERIYCIIYPFGRAFTS-----KKLWLYCLGLAMFLLILFFIPFF 145
Query: 155 PSVAYAHWQYLFSYQSHSD-DPFYVPLCFCGHGR 57
A + Y F Y S D D + L F + R
Sbjct: 146 GGCADNYSFYDFDYTSECDPDDHPITLMFDEYAR 179
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,131,618
Number of Sequences: 1657284
Number of extensions: 9163269
Number of successful extensions: 27928
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 27065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27904
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -