Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0121
         (529 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.41 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.3  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   2.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.7  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -1

Query: 142 TRIGSTSSLTKATVTTLSTCLCVFADTGA 56
           TRI ST S    T  TL TC  V    GA
Sbjct: 42  TRISSTVSRNTDTYPTLETCRLVCGKYGA 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 19   WSRHQETCSSPLPRPCPQKHRGT*KGSSLW 108
            W++ ++ C  P    C +K  G    +S W
Sbjct: 1137 WNKERKICDWPKSAKCEEKKPGHKPSTSSW 1166


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 214 QED*QASIPLTLHEAKGNVFKNKRVLMEYIHRKKAEKAR 330
           Q+  Q  I LTL E  G +  N    M+Y+ +   E  R
Sbjct: 302 QKKLQKEIDLTLQENHGKISYNVLQSMKYLDQVVCESLR 340


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 444 SEGLQQFLLLGGNTFLAALACL 379
           SE ++QFL     TF+A LA L
Sbjct: 461 SEMVKQFLFTQKFTFVAGLATL 482


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,725
Number of Sequences: 336
Number of extensions: 2225
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)