Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0121
(529 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 112 8e-25
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 112 8e-25
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 112 8e-25
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 112 8e-25
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 112 8e-25
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 112 8e-25
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 112 8e-25
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 112 8e-25
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 112 8e-25
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 112 8e-25
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 112 bits (269), Expect = 8e-25
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 45 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 105 LLRRYRESKKIDRHMYHSLYLK 126
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 126 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 112 bits (269), Expect = 8e-25
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 45 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 105 LLRRYRESKKIDRHMYHSLYLK 126
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 126 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 112 bits (269), Expect = 8e-25
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 54 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 113
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 114 LLRRYRESKKIDRHMYHSLYLK 135
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 135 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 167
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 112 bits (269), Expect = 8e-25
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 45 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 105 LLRRYRESKKIDRHMYHSLYLK 126
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 126 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 112 bits (269), Expect = 8e-25
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 45 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 105 LLRRYRESKKIDRHMYHSLYLK 126
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 126 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 112 bits (269), Expect = 8e-25
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 45 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 105 LLRRYRESKKIDRHMYHSLYLK 126
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 126 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 112 bits (269), Expect = 8e-25
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 45 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 105 LLRRYRESKKIDRHMYHSLYLK 126
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 126 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 112 bits (269), Expect = 8e-25
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 45 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 105 LLRRYRESKKIDRHMYHSLYLK 126
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 126 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 112 bits (269), Expect = 8e-25
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 26 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 85
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 86 LLRRYRESKKIDRHMYHSLYLK 107
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 107 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 139
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 112 bits (269), Expect = 8e-25
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 11 IKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXX 190
IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 45 IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR 104
Query: 191 XXXXXXTAKKIDRHLYHSLYMR 256
+KKIDRH+YHSLY++
Sbjct: 105 LLRRYRESKKIDRHMYHSLYLK 126
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 253 EAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 351
+ KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 126 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,411,367
Number of Sequences: 237096
Number of extensions: 1547892
Number of successful extensions: 3579
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3569
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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