Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0118
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    25   0.60 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    25   0.60 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.60 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.8  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 452 TILLGFYFTILQAYEYIEALLQLLIEFM 535
           T+LLG  F    A+EYI+   Q ++ F+
Sbjct: 122 TLLLGVDFVKEYAFEYIQLYSQFILYFL 149


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 452 TILLGFYFTILQAYEYIEALLQLLIEFM 535
           T+LLG  F    A+EYI+   Q ++ F+
Sbjct: 122 TLLLGVDFVKEYAFEYIQLYSQFILYFL 149


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 452 TILLGFYFTILQAYEYIEALLQLLIEFM 535
           T+LLG  F    A+EYI+   Q ++ F+
Sbjct: 442 TLLLGVDFVKEYAFEYIQLYSQFILYFL 469


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 442 IIFNYFIRILFYYFTS 489
           + F +FI   FY+FT+
Sbjct: 237 VSFYFFISTFFYFFTT 252


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 442 IIFNYFIRILFYYFTS 489
           + F +FI   FY+FT+
Sbjct: 233 VSFYFFISTFFYFFTT 248


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 546 FHSXRISWNSVIIGTLFLLIC 608
           F+       S I G LFLLIC
Sbjct: 2   FYQLTACVGSAIAGFLFLLIC 22


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 612 IRHLNNHFSKNHHF 653
           ++ L+NH  KN H+
Sbjct: 560 LKELSNHMVKNSHY 573


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,535
Number of Sequences: 336
Number of extensions: 2468
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)