Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0117
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     25   0.59 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.5  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -3

Query: 328 LKVMSLDILSNQHQWECCVG*XGTTIKNCKLCWMECIISHHVFN 197
           +K+ S  +LS +HQ +  +    +++ NC+  + EC    HV N
Sbjct: 470 MKLQSFPLLSQRHQIDAKMFCNESSVSNCENEYCECT---HVVN 510



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 257 HHQELQTVLDGVYYFSSC 204
           HHQ+    +DGV + + C
Sbjct: 138 HHQKNSPYMDGVPFVTQC 155


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 231 GWSVLFLIMCSTKQYL 184
           GW +LFLI  +T Q L
Sbjct: 226 GWQILFLITYATLQIL 241


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 231 GWSVLFLIMCSTKQYL 184
           GW +LFLI  +T Q L
Sbjct: 226 GWQILFLITYATLQIL 241


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 338 KESKRELVQKSSVCPCHTLRN 400
           K+ K+EL++++   P H++ N
Sbjct: 237 KDEKKELIRQTHKSPSHSVDN 257


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 297 FDSISKDITFNSVPKNQKESSFRRA 371
           +  +SK ++F S+P  +    F R+
Sbjct: 44  YSPVSKPVSFESLPNRRLHEEFLRS 68


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 79  HFSGSLYMSSKRLQPL 32
           HFS S Y S KRL  L
Sbjct: 255 HFSSSSYSSRKRLAML 270


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 79  HFSGSLYMSSKRLQPL 32
           HFS S Y S KRL  L
Sbjct: 255 HFSSSSYSSRKRLAML 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,651
Number of Sequences: 336
Number of extensions: 3287
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)