Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0112
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.2  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   8.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   8.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 275 FEYYDSFHYFKENFFYYH 222
           F+YY S+ ++K N   YH
Sbjct: 426 FQYYVSYDFYKMNHPVYH 443


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 339 NM*VNKICKKILL*IYYFNCMLD 407
           N+ +N+I K   L   Y NC+LD
Sbjct: 28  NIDLNQILKSDRLLKNYVNCLLD 50


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 568 WHFMSVTDYEGLKKIKLKN 624
           WH+  V  +EG ++I  KN
Sbjct: 208 WHWHLVYPFEGAREIVDKN 226


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 285  INTISVMLCYLCVCGFTLNM*VNKICKKILL 377
            +N + + LC  CV  F  +  +  + K I++
Sbjct: 1129 LNCVYLFLCGFCVYEFASDERIKLVIKAIII 1159


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 339 NM*VNKICKKILL*IYYFNCMLD 407
           N+ +N+I K   L   Y NC+LD
Sbjct: 28  NIDLNQILKSDRLLKNYVNCLLD 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,386
Number of Sequences: 336
Number of extensions: 3334
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)