Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0109
         (636 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1SR34 Cluster: Putative uncharacterized protein; n=2; ...    36   1.1  
UniRef50_A2ESJ0 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_A6S678 Cluster: Putative uncharacterized protein; n=2; ...    33   7.6  

>UniRef50_A1SR34 Cluster: Putative uncharacterized protein; n=2;
           Psychromonas|Rep: Putative uncharacterized protein -
           Psychromonas ingrahamii (strain 37)
          Length = 157

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = -3

Query: 562 LNFTTTAYSPLPNARVHL*ICATEFATRSLCVLEATNISCDMMSFVSYI-QADIRESRED 386
           L+  T+ +   P ++  L   A E + R     E   ISCD   F+SY+ QADI  +   
Sbjct: 47  LDNLTSLHEQNPESKTQL---AKETSHRIYSAAEQHRISCDGQGFISYLNQADILNTHTQ 103

Query: 385 DHVVE*ILGMKVD 347
           + V++ ++ + VD
Sbjct: 104 EVVIDCVMSLDVD 116


>UniRef50_A2ESJ0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 94

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +2

Query: 242 FPFKLPHIISALTLISQIPSK-VHPSH--FRTPPPHITVYFHTQ 364
           FP   PH  S L + SQIPS  +H +   FR+PP H  +   TQ
Sbjct: 25  FPLNSPHYSSILLITSQIPSDLLHSTQTLFRSPPFHSHLLHSTQ 68


>UniRef50_A6S678 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 499

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 223 SAHKLSFSIQATTYHLCTHPNLANPIQGASKSF*DAPSS-HYR 348
           SAH+L  ++  T Y+LC HP    P+    ++    P   HY+
Sbjct: 298 SAHQLPLALTFTIYNLCLHPEYIEPLTEEIRTMLSLPEEVHYK 340


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,958,460
Number of Sequences: 1657284
Number of extensions: 10979782
Number of successful extensions: 25844
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25825
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)