Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0107
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.5  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   8.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   8.2  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +3

Query: 21   AAAGASGTRAPYTVNXNISALHPKT 95
            AAAGAS    P T+      L PKT
Sbjct: 1138 AAAGASNVDVPSTIAETDEYLQPKT 1162


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +3

Query: 420 ASRHSRPVSV--EFREILSPRHTIVLESRVSVPCYECLYICLYSFSI 554
           A RH  P +   E+R +      +  ++  S  CY   +ICLY F I
Sbjct: 197 ALRHVGPAAKVSEYRSLWLRLSKLARDTGFST-CYTFTFICLYLFFI 242


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 195 GNKSLCLLGIRGSRGYEARGRSPAGAACRT 106
           G+K +C+ G +G +G  A+G    GA   T
Sbjct: 271 GDKGVCIKGEKGQKG--AKGEEVYGATGTT 298


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,203
Number of Sequences: 2352
Number of extensions: 10023
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)