Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0107
(640 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein. 29 4.0
BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p pro... 29 4.0
AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-P... 29 4.0
AE014134-254|AAF51372.1| 418|Drosophila melanogaster CG31928-PA... 29 4.0
D50542-1|BAA09102.1| 486|Drosophila melanogaster GATA transcrip... 29 5.3
AY071369-1|AAL48991.1| 486|Drosophila melanogaster RE40104p pro... 29 5.3
AE014297-700|AAF54195.1| 486|Drosophila melanogaster CG9656-PA ... 29 5.3
AE014297-754|AAF54238.1| 819|Drosophila melanogaster CG11718-PA... 29 7.0
BT001498-1|AAN71253.1| 484|Drosophila melanogaster LD33682p pro... 28 9.3
AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p pro... 28 9.3
AY051688-1|AAK93112.1| 477|Drosophila melanogaster LD23642p pro... 28 9.3
AF079101-1|AAD12369.1| 477|Drosophila melanogaster arginine-tRN... 28 9.3
AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-P... 28 9.3
AE013599-2977|AAF57497.3| 484|Drosophila melanogaster CG9204-PB... 28 9.3
AE013599-2975|AAF57496.3| 477|Drosophila melanogaster CG9204-PA... 28 9.3
>U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein.
Length = 1221
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +2
Query: 56 HREXXHQRSAPQDHRGRVRHAAPAGDRPRASYPRDPLIPSRHKLL 190
H + HQ+ Q H RH P + P + DP S +L
Sbjct: 534 HHQQHHQQQQQQQHVAAYRHRLPKSETPETNSSLDPNDASEDPIL 578
>BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p
protein.
Length = 1188
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +2
Query: 56 HREXXHQRSAPQDHRGRVRHAAPAGDRPRASYPRDPLIPSRHKLL 190
H + HQ+ Q H RH P + P + DP S +L
Sbjct: 557 HHQQHHQQQQQQQHVAAYRHRLPKSETPETNSSLDPNDASEDPIL 601
>AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-PA
protein.
Length = 1165
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +2
Query: 56 HREXXHQRSAPQDHRGRVRHAAPAGDRPRASYPRDPLIPSRHKLL 190
H + HQ+ Q H RH P + P + DP S +L
Sbjct: 534 HHQQHHQQQQQQQHVAAYRHRLPKSETPETNSSLDPNDASEDPIL 578
>AE014134-254|AAF51372.1| 418|Drosophila melanogaster CG31928-PA
protein.
Length = 418
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 20 SRRWRKRHASTLHREXXHQRSAPQDHRGRVR 112
SRRWRK LHRE H + H ++R
Sbjct: 26 SRRWRKSVQLKLHRETNHTKILSSFHNQKLR 56
>D50542-1|BAA09102.1| 486|Drosophila melanogaster GATA
transcription factor protein.
Length = 486
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = +2
Query: 53 LHREXXHQRSAPQDHRGRVR----HAAPAGDRPRASYPRDPLIPSRHKLLFPA 199
L H+R P H+ R HA+P RP P P + S HK PA
Sbjct: 91 LESNGHHRRYYPSYHQHTSRMPSTHASPQVCRPHFHTPLSPWLTSEHKSFAPA 143
>AY071369-1|AAL48991.1| 486|Drosophila melanogaster RE40104p
protein.
Length = 486
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = +2
Query: 53 LHREXXHQRSAPQDHRGRVR----HAAPAGDRPRASYPRDPLIPSRHKLLFPA 199
L H+R P H+ R HA+P RP P P + S HK PA
Sbjct: 91 LESNGHHRRYYPSYHQHTSRMPSTHASPQVCRPHFHTPLSPWLTSEHKSFAPA 143
>AE014297-700|AAF54195.1| 486|Drosophila melanogaster CG9656-PA
protein.
Length = 486
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = +2
Query: 53 LHREXXHQRSAPQDHRGRVR----HAAPAGDRPRASYPRDPLIPSRHKLLFPA 199
L H+R P H+ R HA+P RP P P + S HK PA
Sbjct: 91 LESNGHHRRYYPSYHQHTSRMPSTHASPQVCRPHFHTPLSPWLTSEHKSFAPA 143
>AE014297-754|AAF54238.1| 819|Drosophila melanogaster CG11718-PA
protein.
Length = 819
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 20 SRRWRKRHASTLHREXXHQRSAPQDHRGRVRHAAPAGDRPRASYPRDP 163
S+ R+R LHR+ Q+ Q H ++H A R ++ + P
Sbjct: 494 SQEMRQRLVQQLHRQRLQQQQLQQQHEPHLQHQQIARSRTQSQPQKQP 541
>BT001498-1|AAN71253.1| 484|Drosophila melanogaster LD33682p
protein.
Length = 484
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 458 AKLNGHGTRMTRCLADEIILCDYLTVKKQTNKQNVTSHFRHVLPTLYSEEKKNTV 294
AKL + T+ L E L D+L +TNK + HV Y +E + T+
Sbjct: 203 AKLGDSASYSTKSLTQEKTLRDFLNTDSETNKHRLKLRLIHV----YDDEFRRTL 253
>AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p protein.
Length = 1843
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 111 RTLPRWSWGAER*CXCSRC 55
RT+P W ER C C RC
Sbjct: 1618 RTVPDGRWSCERCCFCMRC 1636
>AY051688-1|AAK93112.1| 477|Drosophila melanogaster LD23642p
protein.
Length = 477
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 458 AKLNGHGTRMTRCLADEIILCDYLTVKKQTNKQNVTSHFRHVLPTLYSEEKKNTV 294
AKL + T+ L E L D+L +TNK + HV Y +E + T+
Sbjct: 196 AKLGDSASYSTKSLTQEKTLRDFLNTDSETNKHRLKLRLIHV----YDDEFRRTL 246
>AF079101-1|AAD12369.1| 477|Drosophila melanogaster
arginine-tRNA-protein transferase1 protein.
Length = 477
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 458 AKLNGHGTRMTRCLADEIILCDYLTVKKQTNKQNVTSHFRHVLPTLYSEEKKNTV 294
AKL + T+ L E L D+L +TNK + HV Y +E + T+
Sbjct: 196 AKLGDSASYSTKSLTQEKTLRDFLNTDSETNKHRLKLRLIHV----YDDEFRRTL 246
>AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-PA
protein.
Length = 2006
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 111 RTLPRWSWGAER*CXCSRC 55
RT+P W ER C C RC
Sbjct: 1781 RTVPDGRWSCERCCFCMRC 1799
>AE013599-2977|AAF57497.3| 484|Drosophila melanogaster CG9204-PB,
isoform B protein.
Length = 484
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 458 AKLNGHGTRMTRCLADEIILCDYLTVKKQTNKQNVTSHFRHVLPTLYSEEKKNTV 294
AKL + T+ L E L D+L +TNK + HV Y +E + T+
Sbjct: 203 AKLGDSASYSTKSLTQEKTLRDFLNTDSETNKHRLKLRLIHV----YDDEFRRTL 253
>AE013599-2975|AAF57496.3| 477|Drosophila melanogaster CG9204-PA,
isoform A protein.
Length = 477
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 458 AKLNGHGTRMTRCLADEIILCDYLTVKKQTNKQNVTSHFRHVLPTLYSEEKKNTV 294
AKL + T+ L E L D+L +TNK + HV Y +E + T+
Sbjct: 196 AKLGDSASYSTKSLTQEKTLRDFLNTDSETNKHRLKLRLIHV----YDDEFRRTL 246
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,527,965
Number of Sequences: 53049
Number of extensions: 408429
Number of successful extensions: 896
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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