Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0106
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    26   0.26 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   5.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.3  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +2

Query: 2   LFKIYLLKICDFVYKKFDYL 61
           +F++YLL +CD + ++FD +
Sbjct: 207 IFQLYLLILCDQILREFDQI 226



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 362 TTMREISSLNLYIRTIY 412
           TT+R I  L+LY   IY
Sbjct: 11  TTLRLIRDLSLYFSVIY 27


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 247 RIRKEHLEIAFKECSASGL 303
           R+R E LE+A KE   +GL
Sbjct: 216 RLRGETLEVAIKEDREAGL 234


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = -3

Query: 379 YFSHCRNSVWEC 344
           +  HC N+ W C
Sbjct: 152 FMLHCNNTTWRC 163


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 391 SVHKNNLYPEPKWKAQ 438
           SV+ N+ YP  K KAQ
Sbjct: 7   SVYNNDFYPIEKTKAQ 22


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 178 SH*SYLIGNVSASFFAY 128
           SH + L+ NVS  FF Y
Sbjct: 126 SHETNLLRNVSVQFFVY 142


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 178 SH*SYLIGNVSASFFAY 128
           SH + L+ NVS  FF Y
Sbjct: 126 SHETNLLRNVSVQFFVY 142


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 380 SSLNLYIRTIYIQNRSGKR 436
           +S++   RT+ ++NR GKR
Sbjct: 3   NSMDFDTRTVRLRNRVGKR 21


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 142 SFFAYSKSTKFKCIVNFCT 86
           ++F Y+     KC+  FCT
Sbjct: 52  TYFIYAFVAPVKCLAFFCT 70


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 142 SFFAYSKSTKFKCIVNFCT 86
           ++F Y+     KC+  FCT
Sbjct: 285 TYFIYAFVAPVKCLAFFCT 303


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 142 SFFAYSKSTKFKCIVNFCT 86
           ++F Y+     KC+  FCT
Sbjct: 285 TYFIYAFVAPVKCLAFFCT 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,329
Number of Sequences: 336
Number of extensions: 3514
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)