Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0106
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   7.0  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   7.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   9.2  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 194 AILDKLTSHILKQCISQPVLGKNTWKSPSKNA 289
           A+ DKLT  + K  +SQP     +  + S NA
Sbjct: 139 ALADKLTPVLAKPSVSQPSRTHTSTNASSLNA 170


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +2

Query: 140  ASTYVADQITSMTPHERRAILDKLTSHILKQCISQPVLGKNTWKSPSKNALHRVLKR 310
            A+ Y+AD I       +RAIL           +S+  L     +   K A+H VLKR
Sbjct: 1114 ANAYLADTIVEAVESSKRAIL----------VLSKSFLYNEWTRFEFKGAIHEVLKR 1160


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 57  TYNKKVWNRYVQKLTMH 107
           TY    WNR+ Q   MH
Sbjct: 357 TYWPHYWNRFTQSTAMH 373


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,400
Number of Sequences: 2352
Number of extensions: 14674
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)