Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0106
(699 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-P... 94 2e-19
AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p pro... 55 1e-07
AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymera... 55 1e-07
L26975-1|AAA62441.1| 1177|Drosophila melanogaster tyrosine kinas... 29 4.6
BT006331-1|AAP20030.1| 1177|Drosophila melanogaster RH47993p pro... 29 4.6
AE014298-1600|AAF48035.1| 1177|Drosophila melanogaster CG1594-PA... 29 4.6
AY051541-1|AAK92965.1| 518|Drosophila melanogaster GH19118p pro... 29 8.0
AE014296-1795|AAN11920.1| 518|Drosophila melanogaster CG6640-PB... 29 8.0
AE014296-1794|AAF50173.1| 916|Drosophila melanogaster CG6640-PA... 29 8.0
>AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-PA
protein.
Length = 525
Score = 93.9 bits (223), Expect = 2e-19
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
Frame = +1
Query: 241 TARIRKEHLEIAFKECSASGLEETETVLNVIDAFNIPKLSYDNERNKFVKSVHKNNLYPE 420
T + + LE A E + GL+E ETV +IDAF +P+ Y+ KF L
Sbjct: 61 TPHVERAALEKAINELNRVGLDEGETVFALIDAFTVPRFRYNQRIKKFELDTQPRQLLTA 120
Query: 421 PKWKAQFLIDRYEIIWQRTVRNKLFA----QEACLHWAEEKYFQLRKIEALLSSSSRIDD 588
P+ K+ ++ RY ++ Q+T+R+ LFA Q+ A+ K F+L+ E LL++S+ + +
Sbjct: 121 PRMKSDYMQQRYAMLLQKTLRHDLFAPAVIQDGVGAEAQAKKFKLQFAENLLATSA-MKE 179
Query: 589 VIVLGLLIQLTEGNITWKIQLGSVVLDMSPTRYHS 693
+VLGLL QL EG + G V LD++ R+H+
Sbjct: 180 AVVLGLLTQLKEGKFYVEDPTGCVQLDLTGARFHA 214
Score = 41.5 bits (93), Expect = 0.001
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +2
Query: 83 VRAEVNNAFKLSGFTIRKEASTYVADQITSMTPHERRAILDKLTSHILKQCISQPVLGKN 262
+R + N FKL GF IR E S+Y+A+Q+ ER L +T ++ Q + P + +
Sbjct: 8 LRKRITNTFKLCGFLIRSENSSYLAEQLLPFDAAERDKWLTVITENLQSQKLLTPHVERA 67
Query: 263 TWKSPSKNALHRV 301
+ + N L+RV
Sbjct: 68 ALEK-AINELNRV 79
>AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p
protein.
Length = 403
Score = 54.8 bits (126), Expect = 1e-07
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Frame = +1
Query: 430 KAQFLIDRYEIIWQRTVRNKLFA----QEACLHWAEEKYFQLRKIEALLSSSSRIDDVIV 597
K+ ++ RY ++ Q+T+R+ LFA Q+ A+ K F+L+ E LL++S+ + + +V
Sbjct: 2 KSDYMQQRYAMLLQKTLRHDLFAPAVIQDGVGAEAQAKKFKLQFAENLLATSA-MKEAVV 60
Query: 598 LGLLIQLTEGNITWKIQLGSVVLDMSPTRYHS 693
LGLL QL EG + G V LD++ R+H+
Sbjct: 61 LGLLTQLKEGKFYVEDPTGCVQLDLTGARFHA 92
>AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymerase
epsilon secondsubunit protein.
Length = 403
Score = 54.8 bits (126), Expect = 1e-07
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Frame = +1
Query: 430 KAQFLIDRYEIIWQRTVRNKLFA----QEACLHWAEEKYFQLRKIEALLSSSSRIDDVIV 597
K+ ++ RY ++ Q+T+R+ LFA Q+ A+ K F+L+ E LL++S+ + + +V
Sbjct: 2 KSDYMQQRYAMLLQKTLRHDLFAPAVIQDGVGAEAQAKKFKLQFAENLLATSA-MKEAVV 60
Query: 598 LGLLIQLTEGNITWKIQLGSVVLDMSPTRYHS 693
LGLL QL EG + G V LD++ R+H+
Sbjct: 61 LGLLTQLKEGKFYVEDPTGCVQLDLTGARFHA 92
>L26975-1|AAA62441.1| 1177|Drosophila melanogaster tyrosine kinase
protein.
Length = 1177
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 285 FFEGDFQVFFPNTGCEIHCFKMC-EVNLSRIARRSCGVIE 169
F G+F+ F PN CE C MC ++ ++ IA+ G+ E
Sbjct: 53 FTTGEFERFHPNMLCEEICNTMCRQLGIAPIAQLLYGIRE 92
>BT006331-1|AAP20030.1| 1177|Drosophila melanogaster RH47993p
protein.
Length = 1177
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 285 FFEGDFQVFFPNTGCEIHCFKMC-EVNLSRIARRSCGVIE 169
F G+F+ F PN CE C MC ++ ++ IA+ G+ E
Sbjct: 53 FTTGEFERFHPNMLCEEICNTMCRQLGIAPIAQLLYGIRE 92
>AE014298-1600|AAF48035.1| 1177|Drosophila melanogaster CG1594-PA
protein.
Length = 1177
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 285 FFEGDFQVFFPNTGCEIHCFKMC-EVNLSRIARRSCGVIE 169
F G+F+ F PN CE C MC ++ ++ IA+ G+ E
Sbjct: 53 FTTGEFERFHPNMLCEEICNTMCRQLGIAPIAQLLYGIRE 92
>AY051541-1|AAK92965.1| 518|Drosophila melanogaster GH19118p
protein.
Length = 518
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 482 LTVLCHIISYLSIKNCAFHFGSGYKLF 402
LT + I +L I C F+FG GY F
Sbjct: 451 LTFITEIFVFLIINVCDFNFGQGYNYF 477
>AE014296-1795|AAN11920.1| 518|Drosophila melanogaster CG6640-PB,
isoform B protein.
Length = 518
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 482 LTVLCHIISYLSIKNCAFHFGSGYKLF 402
LT + I +L I C F+FG GY F
Sbjct: 451 LTFITEIFVFLIINVCDFNFGQGYNYF 477
>AE014296-1794|AAF50173.1| 916|Drosophila melanogaster CG6640-PA,
isoform A protein.
Length = 916
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 482 LTVLCHIISYLSIKNCAFHFGSGYKLF 402
LT + I +L I C F+FG GY F
Sbjct: 849 LTFITEIFVFLIINVCDFNFGQGYNYF 875
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,800,692
Number of Sequences: 53049
Number of extensions: 611355
Number of successful extensions: 1338
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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