Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0105
(655 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 25 0.72
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 22 5.1
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.1
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 5.1
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 5.1
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 21 8.9
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 24.6 bits (51), Expect = 0.72
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 326 QNVFLH*PIFV**CSGYTENDS*NPWLTLYYYFSLDIP 439
Q+ F+ P+FV Y+ N NPW +Y F+ ++P
Sbjct: 292 QSPFIDGPVFVILTLLYSLNSCVNPW--IYLAFNRELP 327
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 415 LLLFFRYPLLIFITVF 462
+L+FF +PL I I V+
Sbjct: 242 ILIFFIFPLAILIIVY 257
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.1
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 407 TLYYYFSLDIP 439
TLYY+F+L +P
Sbjct: 211 TLYYFFNLIVP 221
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 140 GIFRSKCFLSIFW 178
GIF+S C + I W
Sbjct: 122 GIFKSTCKMDITW 134
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.1
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 407 TLYYYFSLDIP 439
TLYY+F+L +P
Sbjct: 211 TLYYFFNLIVP 221
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 140 GIFRSKCFLSIFW 178
GIF+S C + I W
Sbjct: 122 GIFKSTCKMDITW 134
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.1
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 407 TLYYYFSLDIP 439
TLYY+F+L +P
Sbjct: 211 TLYYFFNLIVP 221
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 140 GIFRSKCFLSIFW 178
GIF+S C + I W
Sbjct: 122 GIFKSTCKMDITW 134
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.1
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 407 TLYYYFSLDIP 439
TLYY+F+L +P
Sbjct: 211 TLYYFFNLIVP 221
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 140 GIFRSKCFLSIFW 178
GIF+S C + I W
Sbjct: 122 GIFKSTCKIDITW 134
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.1
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 407 TLYYYFSLDIP 439
TLYY+F+L +P
Sbjct: 211 TLYYFFNLIVP 221
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 140 GIFRSKCFLSIFW 178
GIF+S C + I W
Sbjct: 122 GIFKSTCKMDITW 134
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 204 NQVSILLIPIFGTEPLSIKNFFK*NCYLLL 293
+ SI IFG E + + FK YL+L
Sbjct: 82 SSTSIYAYFIFGAETIFVTMVFKERLYLIL 111
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 204 NQVSILLIPIFGTEPLSIKNFFK*NCYLLL 293
+ SI IFG E + + FK YL+L
Sbjct: 82 SSTSIYAYFIFGAETIFVTMVFKERLYLIL 111
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 21.0 bits (42), Expect = 8.9
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 7/46 (15%)
Frame = +3
Query: 153 LSAFYRYSGSQY-------VVIHCNQVSILLIPIFGTEPLSIKNFF 269
L AFY + Q+ V+I V +L +FG S N+F
Sbjct: 17 LDAFYFFETEQFTLLWVLFVIIVAGNVGVLYTLLFGRSRKSRMNYF 62
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,145
Number of Sequences: 336
Number of extensions: 3301
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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