Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0105
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047434-1|AAH47434.1|  707|Homo sapiens SETDB2 protein protein.       31   4.7  
BC017078-1|AAH17078.1|  288|Homo sapiens SETDB2 protein protein.       31   4.7  
AL139321-6|CAH71048.1|  719|Homo sapiens SET domain, bifurcated ...    31   4.7  
AL136218-4|CAI10817.1|  719|Homo sapiens SET domain, bifurcated ...    31   4.7  
AF334407-1|AAK38373.1|  719|Homo sapiens CLLL8 protein protein.        31   4.7  

>BC047434-1|AAH47434.1|  707|Homo sapiens SETDB2 protein protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = -2

Query: 249 MVRSQKSESIGSILDYSVLRRIVIQNIDKKHLDRKIPIFAYFSE---TAKLGLIWNRSY 82
           ++ + K  ++G  L++S    +++QN+  +  +R  P+ A+F+     A+  L W+  Y
Sbjct: 625 LLDATKEGNVGRFLNHSCCPNLLVQNVFVETHNRNFPLVAFFTNRYVKARTELTWDYGY 683


>BC017078-1|AAH17078.1|  288|Homo sapiens SETDB2 protein protein.
          Length = 288

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = -2

Query: 249 MVRSQKSESIGSILDYSVLRRIVIQNIDKKHLDRKIPIFAYFSE---TAKLGLIWNRSY 82
           ++ + K  ++G  L++S    +++QN+  +  +R  P+ A+F+     A+  L W+  Y
Sbjct: 206 LLDATKEGNVGRFLNHSCCPNLLVQNVFVETHNRNFPLVAFFTNRYVKARTELTWDYGY 264


>AL139321-6|CAH71048.1|  719|Homo sapiens SET domain, bifurcated 2
           protein.
          Length = 719

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = -2

Query: 249 MVRSQKSESIGSILDYSVLRRIVIQNIDKKHLDRKIPIFAYFSE---TAKLGLIWNRSY 82
           ++ + K  ++G  L++S    +++QN+  +  +R  P+ A+F+     A+  L W+  Y
Sbjct: 637 LLDATKEGNVGRFLNHSCCPNLLVQNVFVETHNRNFPLVAFFTNRYVKARTELTWDYGY 695


>AL136218-4|CAI10817.1|  719|Homo sapiens SET domain, bifurcated 2
           protein.
          Length = 719

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = -2

Query: 249 MVRSQKSESIGSILDYSVLRRIVIQNIDKKHLDRKIPIFAYFSE---TAKLGLIWNRSY 82
           ++ + K  ++G  L++S    +++QN+  +  +R  P+ A+F+     A+  L W+  Y
Sbjct: 637 LLDATKEGNVGRFLNHSCCPNLLVQNVFVETHNRNFPLVAFFTNRYVKARTELTWDYGY 695


>AF334407-1|AAK38373.1|  719|Homo sapiens CLLL8 protein protein.
          Length = 719

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = -2

Query: 249 MVRSQKSESIGSILDYSVLRRIVIQNIDKKHLDRKIPIFAYFSE---TAKLGLIWNRSY 82
           ++ + K  ++G  L++S    +++QN+  +  +R  P+ A+F+     A+  L W+  Y
Sbjct: 637 LLDATKEGNVGRFLNHSCCPNLLVQNVFVETHNRNFPLVAFFTNRYVKARTELTWDYGY 695


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,624,640
Number of Sequences: 237096
Number of extensions: 1726366
Number of successful extensions: 1901
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1901
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)