Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0104
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle...    24   4.8  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   8.4  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   8.4  

>EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle
           protein protein.
          Length = 178

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -2

Query: 622 ATCFPLA--YSSIVNHFLAHAPLTHIVFHAXHPYLLRSTSPL 503
           A  +P A  Y++   H+ AHAP+    + A +   L   +PL
Sbjct: 113 AVHYPAAAHYAAPAVHYAAHAPIVKAAYPAAYAAPLAYKTPL 154


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +2

Query: 326 ARPVAPEIKPT---EGAIXXXXXXXSKPKVRNNTFSLLDFSKT*STYLG-SEDRSFNYEC 493
           A P++    PT     A+       + P  R+  F  LDFS + +  L  +   S   EC
Sbjct: 93  ALPLSSRKSPTVSSAAALNSGFPSIANPNPRS-PFRHLDFSTSATAELRRNPSLSAPDEC 151

Query: 494 ART*RRGRPKKI 529
           AR  R G P +I
Sbjct: 152 ARACREGEPPRI 163


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +2

Query: 326 ARPVAPEIKPT---EGAIXXXXXXXSKPKVRNNTFSLLDFSKT*STYLG-SEDRSFNYEC 493
           A P++    PT     A+       + P  R+  F  LDFS + +  L  +   S   EC
Sbjct: 93  ALPLSSRKSPTVSSAAALNSGFPSIANPNPRS-PFRHLDFSTSATAELRRNPSLSAPDEC 151

Query: 494 ART*RRGRPKKI 529
           AR  R G P +I
Sbjct: 152 ARACREGEPPRI 163


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,664
Number of Sequences: 2352
Number of extensions: 12722
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)