Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0104
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL390860-2|CAI16305.1|  307|Homo sapiens olfactory receptor, fam...    30   8.2  
AB065623-1|BAC05849.1|  307|Homo sapiens seven transmembrane hel...    30   8.2  

>AL390860-2|CAI16305.1|  307|Homo sapiens olfactory receptor, family
           13, subfamily G, member 1 protein.
          Length = 307

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 622 ATCFPLAYSSIVNHFLAHAPLTHIV 548
           A CFPL YS+I+NH +  A L+ ++
Sbjct: 122 AICFPLHYSTIMNHHMCVALLSMVM 146


>AB065623-1|BAC05849.1|  307|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 307

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 622 ATCFPLAYSSIVNHFLAHAPLTHIV 548
           A CFPL YS+I+NH +  A L+ ++
Sbjct: 122 AICFPLHYSTIMNHHMCVALLSMVM 146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,011,210
Number of Sequences: 237096
Number of extensions: 1922351
Number of successful extensions: 2765
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2765
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)