Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0103
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   1.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   1.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.3  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   7.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   7.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.7  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 634 KYTFIFSPFSRYFESFSTLKVI 699
           +Y  ++S F  YF  F+TLK++
Sbjct: 136 EYIQLYSQFILYFLLFATLKIL 157


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 634 KYTFIFSPFSRYFESFSTLKVI 699
           +Y  ++S F  YF  F+TLK++
Sbjct: 136 EYIQLYSQFILYFLLFATLKIL 157


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 634 KYTFIFSPFSRYFESFSTLKVI 699
           +Y  ++S F  YF  F+TLK++
Sbjct: 456 EYIQLYSQFILYFLLFATLKIL 477


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 90  IYSVQHVIFVISTYFI 43
           IY  Q+ +FV+ST+ I
Sbjct: 231 IYGFQNFLFVLSTFSI 246


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 219 PKSTESESSGSDKTC 175
           P+ST S +S S K C
Sbjct: 162 PQSTSSNNSASPKAC 176


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 219 PKSTESESSGSDKTC 175
           P+ST S +S S K C
Sbjct: 182 PQSTSSNNSASPKAC 196


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 468  YLFVSNLRCYSQYA 427
            +L +SNL+ Y+QY+
Sbjct: 1060 HLKISNLKTYTQYS 1073


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,933
Number of Sequences: 336
Number of extensions: 2633
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)