Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0103
         (699 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0295 + 2279185-2279368,2279499-2279849,2279960-2280122,228...    29   4.7  
08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818     28   8.2  

>03_01_0295 +
           2279185-2279368,2279499-2279849,2279960-2280122,
           2280141-2280177,2280747-2281367
          Length = 451

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 26  NEMIKMIKYVEMTKITCCTEYIYYLGERIPLDTCF 130
           +E+IK+++ + M +    TEY   LG  +P   CF
Sbjct: 133 SELIKVVEVLHMARCREITEYNLKLGRYVPTRFCF 167


>08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818
          Length = 557

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = -1

Query: 288 CL*VSLLFVVITFVVINKFDEERPKSTESESSGSDKTCFGRRRACVAPSRSDKKQV 121
           CL +S+ F+ +T+VV+ + D      T +  +    T  G    C+   R D++++
Sbjct: 470 CLFISVAFIALTYVVVGRDDWWLAWCTMAIGAVIMLTTLGSMCYCIIAHRMDERKI 525


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,249,057
Number of Sequences: 37544
Number of extensions: 280027
Number of successful extensions: 570
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)