Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0103
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     23   7.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.0  

>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = +2

Query: 284 RHSPLSFSLDILSGS--RFRSGGRYC 355
           R+ P+SF LD  SGS   F    R C
Sbjct: 85  RYQPISFKLDTRSGSEAEFADMSRRC 110


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 21/74 (28%), Positives = 28/74 (37%)
 Frame = +2

Query: 71  TCCTEYIYYLGERIPLDTCFLSDRDGATQARLRPKHVXXXXXXXXXXXXXXXXXXXXITT 250
           TC T Y+ +LG  +PL         G   +++RP+ V                     TT
Sbjct: 429 TCYTLYLEFLGGLVPL-------LKGKRTSKIRPEFVIFDPQVDEVSTYCTYSSDS--TT 479

Query: 251 KVITTKSKLTYRHS 292
              TTKS  T  HS
Sbjct: 480 TTTTTKSASTSSHS 493


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,701
Number of Sequences: 2352
Number of extensions: 11941
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)