Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0101
(609 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7KJV6 Cluster: Ubiquitin-like protein activating enzym... 46 5e-04
UniRef50_Q9UBT2 Cluster: SUMO-activating enzyme subunit 2; n=48;... 45 0.002
UniRef50_Q29FD8 Cluster: GA20416-PA; n=2; Endopterygota|Rep: GA2... 40 0.035
UniRef50_Q642Q1 Cluster: SUMO-activating enzyme subunit 2-A; n=8... 40 0.061
UniRef50_A1IMH8 Cluster: Putative interferon-alpha/beta receptor... 35 1.3
UniRef50_Q2Z1N6 Cluster: Putative uncharacterized protein; n=3; ... 34 2.3
UniRef50_Q15ZN1 Cluster: Twin-arginine translocation pathway sig... 34 3.0
UniRef50_Q6FSP5 Cluster: Chromosome segregation in meiosis prote... 34 3.0
UniRef50_Q4RLJ7 Cluster: Chromosome 10 SCAF15019, whole genome s... 27 3.3
UniRef50_A2DJY9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q9NAN1 Cluster: SUMO-activating enzyme subunit uba-2; n... 33 7.0
UniRef50_UPI0000DB78E6 Cluster: PREDICTED: similar to CG9518-PA;... 32 9.3
UniRef50_Q1ASB2 Cluster: Polynucleotide adenylyltransferase regi... 32 9.3
>UniRef50_Q7KJV6 Cluster: Ubiquitin-like protein activating enzyme;
n=4; Endopterygota|Rep: Ubiquitin-like protein
activating enzyme - Drosophila melanogaster (Fruit fly)
Length = 700
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 9 GETEHNNDKTLEQIGLNDGCALLVDDFLQNYEVRV---RLQQEDEENSWRLVTDTDEPMP 179
GETE N+ K L ++ + DG L DDF QNYE+ + E +EN + +V D + P
Sbjct: 510 GETECNDGKLLSELNIVDGVILKCDDFFQNYELSIIISHFDAERDENLFEVVADASQLKP 569
>UniRef50_Q9UBT2 Cluster: SUMO-activating enzyme subunit 2; n=48;
Eumetazoa|Rep: SUMO-activating enzyme subunit 2 - Homo
sapiens (Human)
Length = 640
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +3
Query: 9 GETEHNNDKTLEQIGLNDGCALLVDDFLQNYEVRVR-LQQED--EENSWRLVTDTDEPMP 179
GETE NN K L + G+ +G L DDFLQ+Y + + L ED ++ + +V D E +
Sbjct: 496 GETEANNHKKLSEFGIRNGSRLQADDFLQDYTLLINILHSEDLGKDVEFEVVGDAPEKV- 554
Query: 180 APKXXXXXXXXXXXXKDPAPGPSRS 254
PK D PS S
Sbjct: 555 GPKQAEDAAKSITNGSDDGAQPSTS 579
>UniRef50_Q29FD8 Cluster: GA20416-PA; n=2; Endopterygota|Rep:
GA20416-PA - Drosophila pseudoobscura (Fruit fly)
Length = 697
Score = 40.3 bits (90), Expect = 0.035
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 9 GETEHNNDKTLEQIGLNDGCALLVDDFLQNYEVRVRLQQEDEE 137
GET N+DK L ++ + DG L DDF QNY + V + D E
Sbjct: 507 GETTDNDDKLLSEMNVVDGAILNCDDFHQNYSLSVIISHFDAE 549
>UniRef50_Q642Q1 Cluster: SUMO-activating enzyme subunit 2-A; n=8;
Bilateria|Rep: SUMO-activating enzyme subunit 2-A -
Xenopus laevis (African clawed frog)
Length = 641
Score = 39.5 bits (88), Expect = 0.061
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 9 GETEHNNDKTLEQIGLNDGCALLVDDFLQNYEVRVRLQQEDE---ENSWRLVTDTDEPMP 179
GET+ NN + + + G+ + L DDFLQ+Y + + + DE + + +V D E P
Sbjct: 494 GETDANNHRKISEFGIRNSSQLQADDFLQDYTLMMNILHSDEMEKDVDFEVVGDVPEKGP 553
>UniRef50_A1IMH8 Cluster: Putative interferon-alpha/beta receptor
alpha chain precursor; n=1; Oncorhynchus mykiss|Rep:
Putative interferon-alpha/beta receptor alpha chain
precursor - Oncorhynchus mykiss (Rainbow trout) (Salmo
gairdneri)
Length = 614
Score = 35.1 bits (77), Expect = 1.3
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +3
Query: 78 VDDFLQNYEVRVRLQQEDEENSWRLVTDTDEP 173
++D L+NY VRVR + E++ + W+ + +T +P
Sbjct: 84 LEDLLKNYNVRVRAELEEQTSDWKYLENTVQP 115
>UniRef50_Q2Z1N6 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 414
Score = 34.3 bits (75), Expect = 2.3
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -3
Query: 304 FVVIFLDYLHITVAVLADLEGPGAGSLAPLEPLA 203
F V F D +HI V D P AGS APL P A
Sbjct: 258 FKVYFFDSMHIVVEFYFDAMHPAAGSRAPLSPAA 291
>UniRef50_Q15ZN1 Cluster: Twin-arginine translocation pathway signal
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Twin-arginine translocation pathway signal precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 327
Score = 33.9 bits (74), Expect = 3.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -3
Query: 454 VK*IGCHLVQSFLRIGANTK--CQKGELKLLTYFDNF 350
+K +GCHLV +R GA+ + CQK ++ T DNF
Sbjct: 243 MKTVGCHLVVELMRQGASPQEACQKAVERIATRLDNF 279
>UniRef50_Q6FSP5 Cluster: Chromosome segregation in meiosis protein
2; n=1; Candida glabrata|Rep: Chromosome segregation in
meiosis protein 2 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 214
Score = 33.9 bits (74), Expect = 3.0
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +2
Query: 371 QFKFPFLTFSIGSDSEK*LN*MTSDLFNLMQIHDC*VSDSEYNMETINNLKVQTVNDLPI 550
Q+ + FLT +G+ +EK + +D N IH +E N N+K+ T DL
Sbjct: 25 QYIYQFLTSEVGTQTEKEV--YFTDSINSFPIHQLQELVNESNQSIYENIKINTALDLHE 82
Query: 551 FNHLIDHNFE 580
+ +I N E
Sbjct: 83 LSSIIKKNTE 92
>UniRef50_Q4RLJ7 Cluster: Chromosome 10 SCAF15019, whole genome
shotgun sequence; n=3; Euteleostomi|Rep: Chromosome 10
SCAF15019, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1434
Score = 27.5 bits (58), Expect(2) = 3.3
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 51 GLNDGCALLVDDFLQNYEVRVRLQQEDEENSWRLVTDTDEPMPAP 185
G D L +DD ++ +LQQ + NSWRL+ ++ PAP
Sbjct: 1330 GFWDLLQLSIDDVTMKFD---QLQQI-KNNSWRLIDSPEKKPPAP 1370
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 225 KDPAPGPSRSARTATVIWR 281
K PAP P ++AR TVI R
Sbjct: 1366 KPPAPVPKKTARQKTVITR 1384
>UniRef50_A2DJY9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 527
Score = 32.7 bits (71), Expect = 7.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 311 LWVRRHLPRLSPYHCRCPGRSGRSWCRILSAI 216
L VRR L P+ C P + +WC+IL+AI
Sbjct: 38 LGVRRIFNELIPFLCNTPALTESNWCKILTAI 69
>UniRef50_Q9NAN1 Cluster: SUMO-activating enzyme subunit uba-2; n=2;
Caenorhabditis elegans|Rep: SUMO-activating enzyme
subunit uba-2 - Caenorhabditis elegans
Length = 582
Score = 32.7 bits (71), Expect = 7.0
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 9 GETEHNNDKTLEQIGLNDGCALLVDDFLQNYEVRVRLQQEDE--ENSWRLVTDTDEPMP 179
G+T+ K L ++ + DG L DDF Q E+++ +++ D + + + EP P
Sbjct: 484 GDTDDLLPKKLAEVSIEDGAILSCDDFQQEMEIKLFIKKGDRLAGDDFEVARSEKEPEP 542
>UniRef50_UPI0000DB78E6 Cluster: PREDICTED: similar to CG9518-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG9518-PA
- Apis mellifera
Length = 542
Score = 32.3 bits (70), Expect = 9.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 509 INNLKVQTVNDLPIFNHLIDH 571
+ +LK+ +NDLP+ HL+DH
Sbjct: 253 LEDLKINVINDLPVGQHLVDH 273
>UniRef50_Q1ASB2 Cluster: Polynucleotide adenylyltransferase region;
n=1; Rubrobacter xylanophilus DSM 9941|Rep:
Polynucleotide adenylyltransferase region - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 510
Score = 32.3 bits (70), Expect = 9.3
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 24 NNDKTLEQIGLNDGCALL-VDDFLQNYEVRVRLQQEDEENSWRLVTD 161
+ ++ +E G G + + D+L+N V RL Q+D+E +WRL +
Sbjct: 451 DGNELMEHFGRGPGRWIKHIKDYLENEVVEGRLAQDDKETAWRLAEE 497
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,992,764
Number of Sequences: 1657284
Number of extensions: 10728497
Number of successful extensions: 25758
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 25049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25747
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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