Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0101
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.5  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.1  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 133 KKILGGW*QIPMNRCRRLKQQKI 201
           +K+ G W +IP +  +R + +KI
Sbjct: 226 RKVCGVWKRIPHDYRKRFRMEKI 248


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 449 INRMSFSSVISPNRSQY 399
           +  M  SS++SPNR+ Y
Sbjct: 343 LGNMIESSILSPNRTYY 359


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 431 SSVISPNRSQY 399
           SS++SPNR+ Y
Sbjct: 349 SSILSPNRNYY 359


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 82  MISYKTMKSGS 114
           MI YKT K+GS
Sbjct: 766 MIDYKTQKTGS 776


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,034
Number of Sequences: 336
Number of extensions: 2550
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)